Protein Alignment Ubx and HHEX

DIOPT Version :10

• Sequence 1: NP_536752.1
• Gene: Ubx / 42034
• FlyBaseID: FBgn0003944
• Length: 389
• Species: Drosophila melanogaster
• Sequence 2: NP_650938.2
• Gene: HHEX / 42495
• FlyBaseID: FBgn0038852
• Length: 323
• Species: Drosophila melanogaster
• Alignment Length: 261
• Identity: 69/261 - (26%)
• Similarity: 99/261 - (37%)
• Gaps: 69/261 - (26%)

  Fly   177 SHRG----GSAGGNVSVSGGNGN-----------AGGVQSGVGVAGAGTAWNA-NCTISGAAAQT 225
            |||.    ||:...|:|:.|...           |.|..|........:|.|. :.:...||||.
  Fly    24 SHRSQSRRGSSQSPVAVTAGIATPHALAMPKASLATGSSSAAPTPSPSSATNIYDLSREAAAAQY 88

  Fly   226 A----------AASSLH-------------------QASNHTFYPWM---AIAGECPEDPTKSKI 258
            |          |.:||.                   |.:...|.|..   |:|......||
  Fly    89 AMKSMDSSAVLAPTSLRFNPIYPDPASLFYQQVLQLQKNPSLFMPHFQAAAVAAAAAVQPT---- 149

  Fly   259 RSDLTQYGGISTDM-GKRYSESLAGSLLPD-------WLGTNGLRRRGRQ-TYTRYQTLELEKEF 314
             :...||...:.|. |.....|.|.:|..:       ::...|::|:|.| .:|..||..||..|
  Fly   150 -AYCDQYSPFTMDCEGFPNPASAAAALYCNAYPAASFYMSNFGVKRKGGQIRFTSQQTKNLEARF 213

  Fly   315 HTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKKEIQAIKELNEQEKQAQAQKAAAAAAAA 379
            .::.||:...|..:|..|.||:||:|.||||||.|.::       .|..::.|.||...|.||..
  Fly   214 ASSKYLSPEERRHLALQLKLTDRQVKTWFQNRRAKWRR-------ANLSKRSASAQGPIAGAAVG 271

  Fly   380 A 380
            :
  Fly   272 S 272

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ubx	NP_536752.1	Homeodomain	296..352	CDD:459649	26/56 (46%)
HHEX	NP_650938.2	Homeodomain	200..251	CDD:459649	23/50 (46%)