DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubx and NK7.1

DIOPT Version :10

Sequence 1:NP_536752.1 Gene:Ubx / 42034 FlyBaseID:FBgn0003944 Length:389 Species:Drosophila melanogaster
Sequence 2:NP_650357.2 Gene:NK7.1 / 41747 FlyBaseID:FBgn0024321 Length:721 Species:Drosophila melanogaster


Alignment Length:245 Identity:64/245 - (26%)
Similarity:82/245 - (33%) Gaps:80/245 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 GGNAANANGQNNPAGGMPVRPS--ACTPDSRVGGYLDTSGGSPVSHRGGSAGGNVSVSGGNGNAG 197
            |.:|........||.......|  |..||      :..:|.|....|......|.|..|.|.|| 
  Fly   309 GKSATKKESSGKPAAKKKKLSSTVALPPD------ISPTGSSDSLMRDKLMANNSSSPGSNVNA- 366

  Fly   198 GVQSGVGVAGAGTAWNANCTISGAAAQTAAASSLHQASNHTFYPWMAIAGECPEDPTKSKIRSDL 262
            .:||           |||.|:                             |..||.:.|.     
  Fly   367 QMQS-----------NANSTL-----------------------------ETTEDDSDSG----- 386

  Fly   263 TQYGGISTDMGKRYSESLAGSLLPDWLGTNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIE 327
                  |||..:                    :::.|.|:|..|..||||.|....||:...|.|
  Fly   387 ------STDARR--------------------KKKARTTFTGRQIFELEKMFENKKYLSASERTE 425

  Fly   328 MAHALCLTERQIKIWFQNRRMKLKKEIQAIKELNEQEKQAQAQKAAAAAA 377
            ||..|.:||.|:||||||||.|.||:.........:.|.:.|:..|...|
  Fly   426 MAKLLMVTETQVKIWFQNRRTKWKKQDNVTNNEAAEHKSSNAKPGATGTA 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UbxNP_536752.1 Homeodomain 296..352 CDD:459649 28/55 (51%)
NK7.1NP_650357.2 Homeodomain 394..450 CDD:459649 28/55 (51%)

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