DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubx and exex

DIOPT Version :10

Sequence 1:NP_536752.1 Gene:Ubx / 42034 FlyBaseID:FBgn0003944 Length:389 Species:Drosophila melanogaster
Sequence 2:NP_648164.1 Gene:exex / 38884 FlyBaseID:FBgn0041156 Length:525 Species:Drosophila melanogaster


Alignment Length:89 Identity:43/89 - (48%)
Similarity:57/89 - (64%) Gaps:5/89 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   293 GLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKKEIQAI 357
            |..||.|..:|..|.|||||:|..|.||:|.:|.|:|..|.|:|.|:||||||||||.|:..:|.
  Fly   437 GKTRRPRTAFTSQQLLELEKQFKQNKYLSRPKRFEVASGLMLSETQVKIWFQNRRMKWKRSKKAQ 501

  Fly   358 KELNE-----QEKQAQAQKAAAAA 376
            :|..|     |::|.|.|..:||:
  Fly   502 QEAKERAKANQQQQQQQQTPSAAS 525

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UbxNP_536752.1 Homeodomain 296..352 CDD:459649 32/55 (58%)
exexNP_648164.1 Homeodomain 440..496 CDD:459649 32/55 (58%)

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