DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubx and vax2

DIOPT Version :10

Sequence 1:NP_536752.1 Gene:Ubx / 42034 FlyBaseID:FBgn0003944 Length:389 Species:Drosophila melanogaster
Sequence 2:NP_919390.1 Gene:vax2 / 373869 ZFINID:ZDB-GENE-030904-8 Length:307 Species:Danio rerio


Alignment Length:159 Identity:46/159 - (28%)
Similarity:68/159 - (42%) Gaps:37/159 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   249 CPEDPTKSKIRSDL---------TQYGGISTDMGKRYSESLAGSLL---PDWL---------GT- 291
            |.:...:||.|:::         |...|.|.......||.....||   ||:.         || 
Zfish    25 CRDRGRESKSRTEVGNRSPVQSSTDTPGTSASTPTSSSEDGHDKLLGVDPDYCRRILVRDAKGTI 89

  Fly   292 ------NGL----RRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNR 346
                  .||    .:|.|.::|..|...||.||....|:..|.|.|:|..|.|:|.|:|:|||||
Zfish    90 REIVLPKGLDLDRPKRTRTSFTAEQLYRLELEFQRCQYVVGRERTELARQLNLSETQVKVWFQNR 154

  Fly   347 RMKLKKEIQAIKELNEQEKQAQAQKAAAA 375
            |.|.||:     :..:.:|::.:...:.|
Zfish   155 RTKQKKD-----QTKDTDKRSSSTSESLA 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UbxNP_536752.1 Homeodomain 296..352 CDD:459649 25/55 (45%)
vax2NP_919390.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..70 9/44 (20%)
Homeodomain 104..160 CDD:459649 25/55 (45%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 155..175 5/24 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 197..254
Blue background indicates that the domain is not in the aligned region.

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