Protein Alignment Ubx and otp

DIOPT Version :10

• Sequence 1: NP_536752.1
• Gene: Ubx / 42034
• FlyBaseID: FBgn0003944
• Length: 389
• Species: Drosophila melanogaster
• Sequence 2: NP_001286654.1
• Gene: otp / 37364
• FlyBaseID: FBgn0015524
• Length: 416
• Species: Drosophila melanogaster
• Alignment Length: 243
• Identity: 59/243 - (24%)
• Similarity: 74/243 - (30%)
• Gaps: 116/243 - (47%)

  Fly   112 GGGGGGGGGGGGAGGTGGAG--NANGGNAANANGQNNPAGGMPVRPSACTPDSRVGGYLDTSGGS 174
            |||.||||..||....||..  :.:||...|:|..|                          ||:
  Fly    45 GGGAGGGGSSGGVPVGGGVARLHISGGLCDNSNALN--------------------------GGN 83

  Fly   175 PVSHRGGSAGGNVSVSGGNGNAGGVQSGVGVAGAGTAWNANCTISGAAAQTAAASSLHQASNHTF 239
                 |.|..||.:.:.||||                 |.|              |:.|...|.
  Fly    84 -----GSSGNGNGNNNNGNGN-----------------NNN--------------SMQQQDQHL- 111

  Fly   240 YPWMAIAGECPEDPTKSKIRSDLTQYGGISTDMGKRYSESLAGSLLPDWLGTNGLRRRGRQTYTR 304
                        |..|.|                                       |.|..:|.
  Fly   112 ------------DKNKQK---------------------------------------RHRTRFTP 125

  Fly   305 YQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKK 352
            .|..|||:.|...||.....|.|:|..:.|||.::::||||||.|.||
  Fly   126 AQLNELERCFSKTHYPDIFMREEIAMRIGLTESRVQVWFQNRRAKWKK 173

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ubx	NP_536752.1	Homeodomain	296..352	CDD:459649	23/55 (42%)
otp	NP_001286654.1	Homeodomain	117..168	CDD:459649	21/89 (24%)