Protein Alignment Ubx and Gsx2

DIOPT Version :9

• Sequence 1: NP_536752.1
• Gene: Ubx / 42034
• FlyBaseID: FBgn0003944
• Length: 389
• Species: Drosophila melanogaster
• Sequence 2: NP_001131035.2
• Gene: Gsx2 / 364140
• RGDID: 1308047
• Length: 305
• Species: Rattus norvegicus
• Alignment Length: 288
• Identity: 88/288 - (30%)
• Similarity: 115/288 - (39%)
• Gaps: 94/288 - (32%)

  Fly   119 GGGGGAGGTGGAGNANGGNAANANGQNNPAGGMPVRPSACTPDSRVGGYLDTSGGSPVSH----- 178
            |.||||.||.||..|.||.|..       .|.:|:..|..:|     |..|......|||
  Rat    77 GAGGGATGTAGAAVAGGGVAGG-------TGALPLLKSQFSP-----GPGDAQFCPRVSHAHHHH 129

  Fly   179 -------------RGGSAGGNVSVSGGNGNAGGVQSGVGVAGAGTAWNANCTISGAAAQTAAASS 230
                         :.|||                      |.|..|         |||..|||::
  Rat   130 HAPQHHHHHHQPQQPGSA----------------------AAAAAA---------AAAAAAAAAA 163

  Fly   231 LHQASNHTFYPWMAIAGECPEDPTKSKIRSDLTQYGGISTDMGKRYSESLAGSLLPDWLGTNGLR 295
            |....:|.  |..|.......||.    |......||..|            |.:|     ||
  Rat   164 LGHPQHHA--PVCAATTYNVSDPR----RFHCLTMGGSDT------------SQVP-----NG-- 203

  Fly   296 RRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKKEIQ----- 355
            :|.|..:|..|.||||:||.:|.||:|.||||:|..|.|:|:|:||||||||:|.|||.:
  Rat   204 KRMRTAFTSTQLLELEREFSSNMYLSRLRRIEIATYLNLSEKQVKIWFQNRRVKHKKEGKGASRN 268

  Fly   356 ---AIKELNEQEKQAQAQKAAAAAAAAA 380
               :.|.:..|...|:::...:.:.|:|
  Rat   269 NHASCKCVGSQAHYARSEDEDSLSPASA 296

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ubx	NP_536752.1	Homeobox	299..352	CDD:395001	31/52 (60%)
Gsx2	NP_001131035.2	Homeobox	207..260	CDD:395001	31/52 (60%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0489
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.810