DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubx and HMX3

DIOPT Version :10

Sequence 1:NP_536752.1 Gene:Ubx / 42034 FlyBaseID:FBgn0003944 Length:389 Species:Drosophila melanogaster
Sequence 2:NP_001099044.1 Gene:HMX3 / 340784 HGNCID:5019 Length:357 Species:Homo sapiens


Alignment Length:263 Identity:65/263 - (24%)
Similarity:89/263 - (33%) Gaps:85/263 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   147 PAGGMPVRPSACTP----DSRVGGYLDTSGGSPV-----SHRGGSAGGNVSV----SGGNGNAGG 198
            ||||...||.|...    ||......|.....|:     .|:...:.....:    |....:...
Human   124 PAGGHLPRPEASEKALLRDSSPASGTDRDSPEPLLKADPDHKELDSKSPDEIILEESDSEESKKE 188

  Fly   199 VQSGVGVAGAGTAWNANCTISGAAAQTAAASSLHQASNHTFYPWMAIAGECPEDPTKSKIRSDLT 263
            .::..|.|||..         ||||.|..|..           |.. ..|.||.....:      
Human   189 GEAAPGAAGASV---------GAAAATPGAED-----------WKK-GAESPEKKPACR------ 226

  Fly   264 QYGGISTDMGKRYSESLAGSLLPDWLGTNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEM 328
                                           :::.|..::|.|..:||..|....||:...|..:
Human   227 -------------------------------KKKTRTVFSRSQVFQLESTFDMKRYLSSSERAGL 260

  Fly   329 AHALCLTERQIKIWFQNRRMKLKKEIQA-IKELNEQEKQAQ-------------AQKAAAAAAAA 379
            |.:|.|||.|:||||||||.|.|:::.| ::..|.....||             |.:.||||||.
Human   261 AASLHLTETQVKIWFQNRRNKWKRQLAAELEAANLSHAAAQRIVRVPILYHENSAAEGAAAAAAG 325

  Fly   380 AAV 382
            |.|
Human   326 APV 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UbxNP_536752.1 Homeodomain 296..352 CDD:459649 24/55 (44%)
HMX3NP_001099044.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..58
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 129..229 23/157 (15%)
Homeodomain 228..284 CDD:459649 24/55 (44%)
Blue background indicates that the domain is not in the aligned region.

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