DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubx and nkx3-2

DIOPT Version :10

Sequence 1:NP_536752.1 Gene:Ubx / 42034 FlyBaseID:FBgn0003944 Length:389 Species:Drosophila melanogaster
Sequence 2:XP_073777336.1 Gene:nkx3-2 / 337865 ZFINID:ZDB-GENE-030127-1 Length:255 Species:Danio rerio


Alignment Length:89 Identity:34/89 - (38%)
Similarity:48/89 - (53%) Gaps:11/89 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   295 RRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKKEIQAIKE 359
            ::|.|..::..|..|||:.|:...||:...|.::|.:|.|||.|:||||||||.|.|:...|...
Zfish   130 KKRSRAAFSHAQVFELERRFNHQRYLSGPERADLAASLKLTETQVKIWFQNRRYKTKRRQMAADL 194

  Fly   360 LNEQEKQAQAQKAAAAAAAAAAVQ 383
            |           |:|.||...||:
Zfish   195 L-----------ASAPAAKKVAVK 207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UbxNP_536752.1 Homeodomain 296..352 CDD:459649 25/55 (45%)
nkx3-2XP_073777336.1 None

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