Protein Alignment Ubx and hlx1

DIOPT Version :10

• Sequence 1: NP_536752.1
• Gene: Ubx / 42034
• FlyBaseID: FBgn0003944
• Length: 389
• Species: Drosophila melanogaster
• Sequence 2: NP_001418073.1
• Gene: hlx1 / 327096
• ZFINID: ZDB-GENE-030131-5304
• Length: 357
• Species: Danio rerio
• Alignment Length: 262
• Identity: 71/262 - (27%)
• Similarity: 116/262 - (44%)
• Gaps: 42/262 - (16%)

  Fly   136 GNAANANGQNN-----------PAGGMPVRPSACTPDSRV-GGYLDTSGGSPVSHRGGSAGGNVS 188
            |:|.|..|.::           .:.|.|:|||..|||:|: ..||         ..|.......:
Zfish    44 GDAENIQGSSSLMAHIGARAQVHSSGSPLRPSPVTPDARLHPAYL---------RHGIHLTSRAA 99

  Fly   189 VSGGNGNAGGVQSGVGVAGAGTAWNANCTISGAAAQ-TAAASSLHQASNH-TFYPWMAIAGECPE 251
            ::.....:..::.|:... ..|.:......|.:... |:..|...|::.| :..|:.|..
Zfish   100 INAPPPTSKDLKFGIDRI-LSTDFEPKSKESPSLRDLTSIVSPNRQSAVHVSASPYFASI----- 158

  Fly   252 DPTKSKIRSDLTQYGGISTDMGK-RYSESLAGS----LLPDWLGTNGLRRR--GRQTYTRYQTLE 309
            |||.|:..|.:...|..:...|: ::.::..|.    |..|.:.....|:|  .|..::..|...
Zfish   159 DPTMSETSSLMGSIGNAARQSGQHQFQDTFPGRPYAVLSKDTMPQTYKRKRSWSRAVFSNLQRKG 223

  Fly   310 LEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLK--KEIQAIKELNEQEKQAQAQKA 372
            |||.|....|:|:..|.::|..|.||:.|:|:||||||||.:  ||.||.|   ::||: |..|:
Zfish   224 LEKRFEIQKYVTKPDRKQLAAMLGLTDAQVKVWFQNRRMKWRHSKEAQAQK---DKEKE-QPDKS 284

  Fly   373 AA 374
            ||
Zfish   285 AA 286

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ubx	NP_536752.1	Homeodomain	296..352	CDD:459649	24/59 (41%)
hlx1	NP_001418073.1	Homeodomain	206..266	CDD:459649	25/59 (42%)