DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubx and HOXD13

DIOPT Version :10

Sequence 1:NP_536752.1 Gene:Ubx / 42034 FlyBaseID:FBgn0003944 Length:389 Species:Drosophila melanogaster
Sequence 2:NP_000514.2 Gene:HOXD13 / 3239 HGNCID:5136 Length:343 Species:Homo sapiens


Alignment Length:343 Identity:78/343 - (22%)
Similarity:123/343 - (35%) Gaps:122/343 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   121 GGGAGGTGGAGNANGGNAANANGQNNPAGGMPVRPSACTPDSRVGGYLDTSGGSPVSHRGGSAGG 185
            ||||||...:.:::...||.|:||.......||             :..|..|...:....:|..
Human    16 GGGAGGAPASSSSSSVAAAAASGQCRGFLSAPV-------------FAGTHSGRAAAAAAAAAAA 67

  Fly   186 NVSVSG--------GNGNAGGVQSGVGVAGAGTAWNA-NC---TISGAAAQTAAASSL------- 231
            ..:.||        ..|::....|...||....|..| .|   |.:.|||...:|.:|       
Human    68 AAAASGFAYPGTSERTGSSSSSSSSAVVAARPEAPPAKECPAPTPAAAAAAPPSAPALGYGYHFG 132

  Fly   232 ---------H---------QASNHTF---YP---WMAIAG------ECPEDPTKSKIRSDLTQYG 266
                     |         ::|.|..   :|   :|.::|      ...|.|.::|   :::.|.
Human   133 NGYYSCRMSHGVGLQQNALKSSPHASLGGFPVEKYMDVSGLASSSVPANEVPARAK---EVSFYQ 194

  Fly   267 GIST---------DMGKRYSE---------SLAGSLLPDWLGTNG-------------------- 293
            |.::         ||...:..         |:.|  ...|...||                    
Human   195 GYTSPYQHVPGYIDMVSTFGSGEPRHEAYISMEG--YQSWTLANGWNSQVYCTKDQPQGSHFWKS 257

  Fly   294 --------------LRRRGRQ---TYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKI 341
                          :.||||:   .||:.|..|||.|:..|.::.:.:|..::.|..|:|||:.|
Human   258 SFPGDVALNQPDMCVYRRGRKKRVPYTKLQLKELENEYAINKFINKDKRRRISAATNLSERQVTI 322

  Fly   342 WFQNRRMKLKKEIQAIKE 359
            ||||||:|.||.:..:|:
Human   323 WFQNRRVKDKKIVSKLKD 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UbxNP_536752.1 Homeodomain 296..352 CDD:459649 26/58 (45%)
HOXD13NP_000514.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..28 6/11 (55%)
polyalanine repeat 57..71 1/13 (8%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 78..115 8/36 (22%)
HoxA13_N <100..172 CDD:463521 14/71 (20%)
Homeodomain 277..333 CDD:459649 23/55 (42%)

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