DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubx and HOXC12

DIOPT Version :10

Sequence 1:NP_536752.1 Gene:Ubx / 42034 FlyBaseID:FBgn0003944 Length:389 Species:Drosophila melanogaster
Sequence 2:NP_776272.1 Gene:HOXC12 / 3228 HGNCID:5124 Length:282 Species:Homo sapiens


Alignment Length:330 Identity:86/330 - (26%)
Similarity:125/330 - (37%) Gaps:126/330 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 YRGFPLSLGMSPYANHHLQRTTQDSPYDASITAACNKIYGDGAGAYKQDCLNIKADAVNGYKDIW 104
            |.|.|:||      |....||.:.:..:            ||.|.|::.|               
Human    68 YLGSPVSL------NPPFGRTCELARVE------------DGKGYYREPC--------------- 99

  Fly   105 NTGGSNGGGGG-----GGGGGGGGAGGTGGAGNANGGNAANANGQNNPAGGMPVRPSACTPDSRV 164
                :.|||||     .|...|.|.|                      |..:|:.||.  |.: :
Human   100 ----AEGGGGGLKREERGRDPGAGPG----------------------AALLPLEPSG--PPA-L 135

  Fly   165 GGYLDTSGGSPVSHRGGSAGGNVSVSGGNGNAGGVQSGVGVAGAGTAWN-ANCTISGAAAQTAAA 228
            |...|.:.|                 ||.|:.||        |||...: .:|    .:.::.::
Human   136 GFKYDYAAG-----------------GGGGDGGG--------GAGPPHDPPSC----QSLESDSS 171

  Fly   229 SSLHQASNHTFYPWMAIAGECPEDPTKSKIRSDLTQYGGISTDMGKRYSESLAGSLLPDWLGTNG 293
            |||....|         .|....||  ..:.|.|...||:|.          :|:   .|...|.
Human   172 SSLLNEGN---------KGAGAGDP--GSLVSPLNPGGGLSA----------SGA---PWYPINS 212

  Fly   294 LRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKKEIQAIK 358
            ..|:.|:.|::.|..|||.||..|.::||:||.|::..|.|:::|:||||||||||.|:.:    
Human   213 RSRKKRKPYSKLQLAELEGEFLVNEFITRQRRRELSDRLNLSDQQVKIWFQNRRMKKKRLL---- 273

  Fly   359 ELNEQ 363
             |.||
Human   274 -LREQ 277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UbxNP_536752.1 Homeodomain 296..352 CDD:459649 28/55 (51%)
HOXC12NP_776272.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 94..129 13/75 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 147..214 22/102 (22%)
Homeodomain 215..271 CDD:459649 28/55 (51%)

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