DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubx and HOXB1

DIOPT Version :10

Sequence 1:NP_536752.1 Gene:Ubx / 42034 FlyBaseID:FBgn0003944 Length:389 Species:Drosophila melanogaster
Sequence 2:NP_002135.2 Gene:HOXB1 / 3211 HGNCID:5111 Length:301 Species:Homo sapiens


Alignment Length:310 Identity:92/310 - (29%)
Similarity:114/310 - (36%) Gaps:95/310 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 CNKIYGDGAGAYKQDCLNI-----KADAVNGYKDIWNTGGSNGGGGGGGGGGGGGAGGTGGAGNA 133
            ||:    |..||.......     .|.||:.|       .|.|..||         |.:..|...
Human    15 CNR----GPSAYSAHSAPTSFPPSSAQAVDSY-------ASEGRYGG---------GLSSPAFQQ 59

  Fly   134 NGGNAANANGQNNPAG-GMP--------VRPSACTPDSRVGGYLDTSGGSPVSHRGGSAGGNVSV 189
            |.|..|    |..|:. |:|        ..|:||:|......|.      |:....|. ||....
Human    60 NSGYPA----QQPPSTLGVPFPSSAPSGYAPAACSPSYGPSQYY------PLGQSEGD-GGYFHP 113

  Fly   190 SGGNGNAGGVQSGVGVAGAGTA--------WNANCTISGAAA---------QTAAASSLHQASNH 237
            |......||:..|.|..|||..        :....|.|.|.|         :|...|..:..:..
Human   114 SSYGAQLGGLSDGYGAGGAGPGPYPPQHPPYGNEQTASFAPAYADLLSEDKETPCPSEPNTPTAR 178

  Fly   238 TFYPWMAIAGECPEDPTKSKIRSDLTQYGGISTDMGKRYSESLAGSLLPDWLGTNGLRRRGRQTY 302
            || .||.:    ..:|.|:                 .:.||...||  |..|.||         :
Human   179 TF-DWMKV----KRNPPKT-----------------AKVSEPGLGS--PSGLRTN---------F 210

  Fly   303 TRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKK 352
            |..|..|||||||.|.||:|.||:|:|..|.|.|.|:||||||||||.||
Human   211 TTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQVKIWFQNRRMKQKK 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UbxNP_536752.1 Homeodomain 296..352 CDD:459649 31/55 (56%)
HOXB1NP_002135.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 20..77 19/76 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 127..149 4/21 (19%)
Antp-type hexapeptide 179..184 3/5 (60%)
Homeodomain 207..260 CDD:459649 33/61 (54%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 254..301 6/7 (86%)

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