DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubx and HOXA9

DIOPT Version :10

Sequence 1:NP_536752.1 Gene:Ubx / 42034 FlyBaseID:FBgn0003944 Length:389 Species:Drosophila melanogaster
Sequence 2:NP_689952.1 Gene:HOXA9 / 3205 HGNCID:5109 Length:272 Species:Homo sapiens


Alignment Length:298 Identity:89/298 - (29%)
Similarity:113/298 - (37%) Gaps:110/298 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 TGGAGN------ANGGNAAN--ANGQNNPAG-GMPVRPSACT---PDSRVGGYLDTSGGSPVSHR 179
            ||..||      ..|.:||:  :.|:..|.. |.|.|.:|..   ||.           ||.|  
Human     4 TGALGNYYVDSFLLGADAADELSVGRYAPGTLGQPPRQAATLAEHPDF-----------SPCS-- 55

  Fly   180 GGSAGGNVSVSGGNGNAGGVQSGVGVAGAGTAWNANCTISGAAAQTAAASSLHQASNHTF-YPWM 243
                               .||...|.||  :||   .:..|.|....|:..|...:|.: :|..
Human    56 -------------------FQSKATVFGA--SWN---PVHAAGANAVPAAVYHHHHHHPYVHPQA 96

  Fly   244 AIAGECPE--------DPTKSKI---------------------RSD----------LTQY--GG 267
            .:|...|:        :||...:                     |.|          ||.|  |.
Human    97 PVAAAAPDGRYMRSWLEPTPGALSFAGLPSSRPYGIKPEPLSARRGDCPTLDTHTLSLTDYACGS 161

  Fly   268 ISTDMGKRYSESL----------AGSLLP--------DWLGTNGLRRRGRQTYTRYQTLELEKEF 314
            ...|..|:.||..          .|...|        :||.....|:: |..||::|||||||||
Human   162 PPVDREKQPSEGAFSENNAENESGGDKPPIDPNNPAANWLHARSTRKK-RCPYTKHQTLELEKEF 225

  Fly   315 HTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKK 352
            ..|.||||.||.|:|..|.|||||:||||||||||:||
Human   226 LFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKK 263

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UbxNP_536752.1 Homeodomain 296..352 CDD:459649 37/55 (67%)
HOXA9NP_689952.1 Hox9_act 1..193 CDD:461369 47/225 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 155..198 9/42 (21%)
Homeodomain 207..263 CDD:459649 38/56 (68%)

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