DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubx and HOXA3

DIOPT Version :10

Sequence 1:NP_536752.1 Gene:Ubx / 42034 FlyBaseID:FBgn0003944 Length:389 Species:Drosophila melanogaster
Sequence 2:NP_109377.1 Gene:HOXA3 / 3200 HGNCID:5104 Length:443 Species:Homo sapiens


Alignment Length:314 Identity:90/314 - (28%)
Similarity:116/314 - (36%) Gaps:113/314 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 ANGGNAANANGQNNPAG------GMPVRPSACTPDSRVGGYLDTSGGSPVSHRGGSAGGNVSVSG 191
            |..|.|.|||.|..||.      |...|| ||:..|.     .::||.|.:|....|        
Human    20 AANGFAYNANQQPYPASAALGADGEYHRP-ACSLQSP-----SSAGGHPKAHELSEA-------- 70

  Fly   192 GNGNAGGVQSGVGVAGAGTAWNANC--TISGAAAQ------------------------------ 224
                                    |  |:|...:|                              
Human    71 ------------------------CLRTLSAPPSQPPSLGEPPLHPPPPQAAPPAPQPPQPAPQP 111

  Fly   225 ----------TAAASSLHQASNHTFYPWMAIAGECP--EDPTKSK--------IRSDLTQYGGIS 269
                      .::||....|||:   |..|.|.:.|  ..||.:|        .|.:..|....|
Human   112 PAPTPAAPPPPSSASPPQNASNN---PTPANAAKSPLLNSPTVAKQIFPWMKESRQNTKQKTSSS 173

  Fly   270 TDMGKRYSESLAGSLLPDWLGTNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCL 334
            :.     .||.||...|....::   :|.|..||..|.:|||||||.|.||.|.||:|||:.|.|
Human   174 SS-----GESCAGDKSPPGQASS---KRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNL 230

  Fly   335 TERQIKIWFQNRRMKLKKEIQAIKELNEQEKQAQAQKAAAAAAAAAAVQGGHLD 388
            |||||||||||||||.||:.:....|.....|:.::......|      ||:|:
Human   231 TERQIKIWFQNRRMKYKKDQKGKGMLTSSGGQSPSRSPVPPGA------GGYLN 278

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UbxNP_536752.1 Homeodomain 296..352 CDD:459649 38/55 (69%)
HOXA3NP_109377.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 75..147 11/74 (15%)
Antp-type hexapeptide 155..160 0/4 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 159..196 9/44 (20%)
Homeodomain 192..248 CDD:459649 38/55 (69%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 247..338 8/38 (21%)
DUF4074 377..441 CDD:463833
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 400..443
Blue background indicates that the domain is not in the aligned region.

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