Protein Alignment Ubx and Hoxc5

DIOPT Version :9

• Sequence 1: NP_536752.1
• Gene: Ubx / 42034
• FlyBaseID: FBgn0003944
• Length: 389
• Species: Drosophila melanogaster
• Sequence 2: NP_001101586.1
• Gene: Hoxc5 / 315341
• RGDID: 1307584
• Length: 222
• Species: Rattus norvegicus
• Alignment Length: 233
• Identity: 80/233 - (34%)
• Similarity: 103/233 - (44%)
• Gaps: 58/233 - (24%)

  Fly   134 NGGNAANANGQNNPAGGMPVR----PSACTPDSRVGGYLDTSGGSPVSHRGGSAGGNVSVSG--- 191
            |.|:|:.........||:.:.    |.|  |.:.:.| :|.: .:|.:|....|....:..|
  Rat    26 NYGSASEVQASRYCYGGLDLSITFPPPA--PSNSLHG-VDMA-ANPRAHPDRPACSAAAAPGHAL 86

  Fly   192 GNGNAGGVQSGV-GVAGAGTAWNANCTISG----AAAQTAAASSLHQ-ASNHTFYPWMAIAGECP 250
            |...|..:..|: ....|..|.......||    ..|||...:.|.| .:....||||
  Rat    87 GRDEAAPLNPGMYSQKAARPALEERAKSSGEIKEEQAQTGQPAGLSQPPAPPQIYPWM------- 144

  Fly   251 EDPTKSKIRSDLTQYGGISTDMGKRYSESLAGSLLPDWLGTNGLRRRGRQTYTRYQTLELEKEFH 315
               ||..:..:                             |:|  :|.|.:||||||||||||||
  Rat   145 ---TKLHMSHE-----------------------------TDG--KRSRTSYTRYQTLELEKEFH 175

  Fly   316 TNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKKE 353
            .|.|||||||||:|:.|||.||||||||||||||.||:
  Rat   176 FNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKWKKD 213

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ubx	NP_536752.1	Homeobox	299..352	CDD:395001	43/52 (83%)
Hoxc5	NP_001101586.1	COG5373	65..>142	CDD:227665	16/76 (21%)
		Homeobox	158..212	CDD:395001	43/53 (81%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0489
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	116	1.000	Inparanoid score	I4717
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000007
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR45659
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	5	4.960