DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubx and nkx2.7

DIOPT Version :10

Sequence 1:NP_536752.1 Gene:Ubx / 42034 FlyBaseID:FBgn0003944 Length:389 Species:Drosophila melanogaster
Sequence 2:NP_571494.1 Gene:nkx2.7 / 30694 ZFINID:ZDB-GENE-990415-179 Length:269 Species:Danio rerio


Alignment Length:62 Identity:29/62 - (46%)
Similarity:39/62 - (62%) Gaps:0/62 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   294 LRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKKEIQ 355
            |||:.|..:::.|..|||:.|....||:...|..:|.||.||..|:||||||||.|.|::.|
Zfish   123 LRRKPRVLFSQTQVFELERRFKQQRYLSAPERDHLALALKLTSTQVKIWFQNRRYKCKRQRQ 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UbxNP_536752.1 Homeodomain 296..352 CDD:459649 25/55 (45%)
nkx2.7NP_571494.1 COG5576 87..210 CDD:227863 29/62 (47%)
Homeodomain 125..181 CDD:459649 25/55 (45%)

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