DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubx and dlx6a

DIOPT Version :10

Sequence 1:NP_536752.1 Gene:Ubx / 42034 FlyBaseID:FBgn0003944 Length:389 Species:Drosophila melanogaster
Sequence 2:NP_571398.1 Gene:dlx6a / 30586 ZFINID:ZDB-GENE-980526-448 Length:247 Species:Danio rerio


Alignment Length:178 Identity:47/178 - (26%)
Similarity:71/178 - (39%) Gaps:50/178 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   220 GAAAQTAAASSL----HQASNHTFYPWMAIAG---ECPEDPTKSKIRSDLTQYGGISTDMGKRYS 277
            |..||.::.|:.    .|:.:....|.||.:.   .|....:....:.|.:.|.|.::     |:
Zfish    10 GLEAQDSSKSAFMEFGQQSHSQQSSPSMAASHYPLHCLHSGSHHHHQHDSSPYSGSNS-----YN 69

  Fly   278 ESLAGS---------LLPDW----LGT----------------------NGLRRRGRQTYTRYQT 307
            .||..|         .||.:    .||                      ||..::.|:..|.|.:
Zfish    70 RSLPYSYVSHPHHSPYLPSYHSNASGTQTRLDATEQQKTTVIENGEIRFNGKGKKIRKPRTIYSS 134

  Fly   308 LELE---KEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKK 352
            |:|:   ..|....||....|.|:|.:|.||:.|:||||||:|.|.||
Zfish   135 LQLQALNHRFQQTQYLALPERAELAASLGLTQTQVKIWFQNKRSKFKK 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UbxNP_536752.1 Homeodomain 296..352 CDD:459649 23/58 (40%)
dlx6aNP_571398.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 22..66 8/43 (19%)
Homeodomain 126..182 CDD:459649 23/55 (42%)

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