DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubx and dlx3b

DIOPT Version :10

Sequence 1:NP_536752.1 Gene:Ubx / 42034 FlyBaseID:FBgn0003944 Length:389 Species:Drosophila melanogaster
Sequence 2:NP_571397.2 Gene:dlx3b / 30585 ZFINID:ZDB-GENE-980526-280 Length:269 Species:Danio rerio


Alignment Length:194 Identity:51/194 - (26%)
Similarity:82/194 - (42%) Gaps:28/194 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   224 QTAAASSLHQASNHTFY---PW-----------MAIAGECP-EDPTKSKI-RSDLTQYGGISTDM 272
            :::|....:.:|:|.:|   |:           ::..|..| ..|||::. .:...|||..:.|:
Zfish    35 ESSATDMGYYSSHHEYYQSPPYPQQMNSYHQFNLSGMGATPGAYPTKTEYPYNTYRQYGHYNRDL 99

  Fly   273 GKRYSESLAGSLLPDWLGTNGLR---RRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCL 334
            ......::......:....||..   |:.|..|:.||...|::.|....||....|.|:|..|.|
Zfish   100 QTPPQSAVKEEPETEVRMVNGKPKKIRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGL 164

  Fly   335 TERQIKIWFQNRRMKLKK-----EIQAIKELNEQEKQAQAQKAAAAA----AAAAAVQGGHLDQ 389
            |:.|:||||||||.|.||     |:......|..:..|.....:.|.    |.::.|..|.:.|
Zfish   165 TQTQVKIWFQNRRSKFKKLYKNGEVPLEHSPNASDSMACNSPPSPAVWDNNAHSSQVNRGQIPQ 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UbxNP_536752.1 Homeodomain 296..352 CDD:459649 25/55 (45%)
dlx3bNP_571397.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..41 1/5 (20%)
DLL_N 28..104 CDD:463567 14/68 (21%)
Homeodomain 126..182 CDD:459649 25/55 (45%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 191..242 7/38 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 250..269
Blue background indicates that the domain is not in the aligned region.

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