DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubx and dlx4b

DIOPT Version :10

Sequence 1:NP_536752.1 Gene:Ubx / 42034 FlyBaseID:FBgn0003944 Length:389 Species:Drosophila melanogaster
Sequence 2:NP_571393.1 Gene:dlx4b / 30581 ZFINID:ZDB-GENE-990415-50 Length:254 Species:Danio rerio


Alignment Length:188 Identity:50/188 - (26%)
Similarity:68/188 - (36%) Gaps:52/188 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   165 GGYLDTSGGSPVSHRGGSAGGNVSVSGGNGNAGGVQSGVGVAGAGTAWNANCTISGAAAQTAAAS 229
            ||:|......|      |:..:.|...|....|.|.:  ...||...:..| ..|||.|.|.|  
Zfish    51 GGHLQHDAPYP------SSAPHYSRPLGYAYPGPVSA--AAPGAYMPYQPN-NHSGALAHTRA-- 104

  Fly   230 SLHQASNHTFYPWMAIAGECPEDPTKSKIRSDLTQYGGISTDMGKRYSESLAGSLLPDWLGTNGL 294
               :.:||          |.|......:||.:         ..||:.                  
Zfish   105 ---EDTNH----------EKPAVIENGEIRLN---------GKGKKI------------------ 129

  Fly   295 RRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKK 352
             |:.|..|:..|...|.:.|....||....|.::|..|.||:.|:||||||:|.|.||
Zfish   130 -RKPRTIYSSVQLQALHQRFQQTQYLALPERADLAAKLGLTQTQVKIWFQNKRSKYKK 186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UbxNP_536752.1 Homeodomain 296..352 CDD:459649 22/55 (40%)
dlx4bNP_571393.1 Homeodomain 130..186 CDD:459649 22/55 (40%)

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