DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubx and dlx2a

DIOPT Version :10

Sequence 1:NP_536752.1 Gene:Ubx / 42034 FlyBaseID:FBgn0003944 Length:389 Species:Drosophila melanogaster
Sequence 2:NP_571386.2 Gene:dlx2a / 30574 ZFINID:ZDB-GENE-980526-212 Length:274 Species:Danio rerio


Alignment Length:124 Identity:42/124 - (33%)
Similarity:55/124 - (44%) Gaps:19/124 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   265 YGGIST----DMGKRYSESLAGSLLPDWLGTNGLR---RRGRQTYTRYQTLELEKEFHTNHYLTR 322
            ||..|:    |..|..||       |:....||..   |:.|..|:.:|...|::.|....||..
Zfish    97 YGSCSSPTPADAEKEESE-------PEIRMVNGKPKKVRKPRTIYSSFQLAALQRRFQKTQYLAL 154

  Fly   323 RRRIEMAHALCLTERQIKIWFQNRRMKLKK-----EIQAIKELNEQEKQAQAQKAAAAA 376
            ..|.|:|.:|.||:.|:||||||||.|.||     ||...:.:...|.........|||
Zfish   155 PERAELAASLGLTQTQVKIWFQNRRSKFKKLWKSGEIPPEQHVASSESPPHPSPPLAAA 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UbxNP_536752.1 Homeodomain 296..352 CDD:459649 24/55 (44%)
dlx2aNP_571386.2 DLL_N 32..107 CDD:463567 3/9 (33%)
Homeodomain 128..184 CDD:459649 24/55 (44%)

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