Protein Alignment Ubx and emx2

DIOPT Version :10

• Sequence 1: NP_536752.1
• Gene: Ubx / 42034
• FlyBaseID: FBgn0003944
• Length: 389
• Species: Drosophila melanogaster
• Sequence 2: NP_571355.2
• Gene: emx2 / 30537
• ZFINID: ZDB-GENE-990415-54
• Length: 247
• Species: Danio rerio
• Alignment Length: 240
• Identity: 62/240 - (25%)
• Similarity: 102/240 - (42%)
• Gaps: 69/240 - (28%)

  Fly   152 PVRPSACTPDSRVGGYLDTSGGSPVSHRGGSAGGNVSVSGGNGNAGGVQSGVGVAGA-GTAWNAN 215
            |:||:|.:       |.::|..:|.            ::|.:.:..||.|..|:..| ..:...|
Zfish    30 PIRPAALS-------YANSSQMNPF------------LNGFHSSGRGVYSNPGLVFAEAVSHPPN 75

  Fly   216 CTI---------SGAAAQTAAASSLH------QASNHTFYPWMAIAGECPEDPTKSKIRSDLTQY 265
            ..:         :.||...:::.|.|      |....|||||:                  :.:|
Zfish    76 SAVPVHSVPPPHALAAHPLSSSHSPHPLFASQQRDPSTFYPWL------------------IHRY 122

  Fly   266 GGISTDMGKRYSESLAGSLLPD-WLGTNGLRRRGRQTYTRY---QTLELEKEFHTNHYLTRRRRI 326
                ..:|.|:.   .....|: :|..|.|.|:.::..|.:   |.|.||..|..|||:....|.
Zfish   123 ----RYLGHRFQ---GNETSPESFLLHNALARKPKRIRTAFSPSQLLRLEHAFEKNHYVVGAERK 180

  Fly   327 EMAHALCLTERQIKIWFQNRRMKLKKEIQAIKELNEQEKQAQAQK 371
            ::||:|.|||.|:|:||||||.|.|::     :|.|:...:|.:|
Zfish   181 QLAHSLSLTETQVKVWFQNRRTKFKRQ-----KLEEEGSDSQQKK 220

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ubx	NP_536752.1	Homeodomain	296..352	CDD:459649	26/58 (45%)
emx2	NP_571355.2	Homeodomain	150..206	CDD:459649	25/55 (45%)