Protein Alignment Ubx and msx3

DIOPT Version :10

• Sequence 1: NP_536752.1
• Gene: Ubx / 42034
• FlyBaseID: FBgn0003944
• Length: 389
• Species: Drosophila melanogaster
• Sequence 2: NP_571347.2
• Gene: msx3 / 30526
• ZFINID: ZDB-GENE-980526-306
• Length: 273
• Species: Danio rerio
• Alignment Length: 264
• Identity: 69/264 - (26%)
• Similarity: 102/264 - (38%)
• Gaps: 50/264 - (18%)

  Fly   140 NANGQNNPAGGMPVRPSACTPDSRVGGYLDTSGGSPVSHRGGSAGGNVSVSGGNGNAGGVQSGV- 203
            |:.|..:..|.:..|.||...|::                   :....:|.|..|.|..:...|
Zfish     9 NSEGPLSQEGKLQERKSADKEDAQ-------------------SNDKAAVKGCKGKALSLPFSVE 54

  Fly   204 GVAGAGTAWNANCTIS--GAAAQTAAASSLHQASNHTFYPWMAIAGECPEDPTKSKIRSDLTQYG 266
            .:....|:.....|.|  |..:.|:.|....:.|....|....|..|...:.:..| |.|:.:.
Zfish    55 SLISDRTSSRTLYTSSEAGIISPTSGADERLKLSPMALYADRKIPVESVSNLSDCK-RGDMEEL- 117

  Fly   267 GISTDMGK-------------RYSESLAGSLLPDWLGTNGLRRRGRQTYTRYQTLELEKEFHTNH 318
               :|.|:             |:|     |..|..|..:...|:.|..:|..|.|.||::|....
Zfish   118 ---SDKGQSGWFQTTSYTSPPRHS-----SPPPCTLRKHKNNRKPRTPFTTSQLLALERKFRQKQ 174

  Fly   319 YLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKKEIQAIKELNEQEKQAQAQKAAAAAAAAAAVQ 383
            ||:...|.|.:::|.|||.|:||||||||.|.|:..:|     |.||...|.|....|.|.....
Zfish   175 YLSIAERAEFSNSLNLTETQVKIWFQNRRAKAKRLQEA-----ELEKLKLATKPLLPAFAFPFPL 234

  Fly   384 GGHL 387
            |.|:
Zfish   235 GTHV 238

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ubx	NP_536752.1	Homeodomain	296..352	CDD:459649	26/55 (47%)
msx3	NP_571347.2	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	114..159		9/53 (17%)
		Homeodomain	152..208	CDD:459649	26/55 (47%)