DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubx and dbx1b

DIOPT Version :10

Sequence 1:NP_536752.1 Gene:Ubx / 42034 FlyBaseID:FBgn0003944 Length:389 Species:Drosophila melanogaster
Sequence 2:NP_571253.1 Gene:dbx1b / 30416 ZFINID:ZDB-GENE-000128-11 Length:322 Species:Danio rerio


Alignment Length:228 Identity:55/228 - (24%)
Similarity:85/228 - (37%) Gaps:63/228 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   155 PSACTPDSRVGGYLDTSG------GSPVSHRGGSAGGNVSVSGGNGNAGGVQSGVGVAGAGTAWN 213
            |||..|.:.|.....||.      .:.::.|..|...::|     .:...::.||....|.|..|
Zfish    61 PSASPPATGVTTLNTTSSAVHVAMSTALAKRSSSPQTSIS-----SDPNYLKFGVNAILASTTRN 120

  Fly   214 AN--CTISGAAAQT----AAASSLHQASNHTFYPWMAIAGECPEDPTKSKIRSDLTQYGGISTDM 272
            |:  ..:.|..|:|    ....|.|.....:::|..:.|...|                      
Zfish   121 ASPPPPVQGMNAKTFPFPCFDGSFHPFIRASYFPASSSAVPIP---------------------- 163

  Fly   273 GKRYSESLAGSLLPDW-LGTNGLRRRG---RQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALC 333
                     |:..  | |...|..|||   |..::..|...|||.|....|:::..|.::|..|.
Zfish   164 ---------GTFA--WPLTARGKPRRGMLRRAVFSDVQRKALEKMFQKQKYISKPDRKKLATKLG 217

  Fly   334 LTERQIKIWFQNRRMKLKKEIQAIKELNEQEKQ 366
            |.:.|:||||||||||.:         |.:|::
Zfish   218 LKDSQVKIWFQNRRMKWR---------NSKERE 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UbxNP_536752.1 Homeodomain 296..352 CDD:459649 25/58 (43%)
dbx1bNP_571253.1 COG5576 <173..296 CDD:227863 28/78 (36%)
Homeodomain 182..236 CDD:459649 22/62 (35%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 238..266 1/4 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 296..322
Blue background indicates that the domain is not in the aligned region.

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