Protein Alignment Ubx and hoxc5a

DIOPT Version :9

• Sequence 1: NP_536752.1
• Gene: Ubx / 42034
• FlyBaseID: FBgn0003944
• Length: 389
• Species: Drosophila melanogaster
• Sequence 2: NP_571219.2
• Gene: hoxc5a / 30379
• ZFINID: ZDB-GENE-980526-533
• Length: 233
• Species: Danio rerio
• Alignment Length: 310
• Identity: 90/310 - (29%)
• Similarity: 122/310 - (39%)
• Gaps: 91/310 - (29%)

  Fly    49 MSPYANHHLQRTTQDSPYDASITAACNKIYGDGAGAYKQDCLNIKADAVNGYKDIWNTGGSNGGG 113
            ||.|......:.|||:       ::|.....|..||:.:  .:....|..|. |:
Zfish     1 MSSYVGKSFSKQTQDA-------SSCRMHTFDNYGAHSE--FHESNYAYEGL-DL---------- 45

  Fly   114 GGGGGGGGGGAGGTGGAGNANGGNAANANGQNNPAGGMPVRPSACTPDSRVGGYLDTSGGSPVSH 178
                    ||:..:....|:....|.|...:...:..:....|.....||  .::.|.|.:|:||
Zfish    46 --------GGSFSSQIPTNSLRREAINTTDRARSSAAVQRTQSCSALGSR--SFVSTHGYNPLSH 100

  Fly   179 --RGGSAGGNVSV---SGGNGNAGGVQSGVGVAGAGTAWNANCTISGAAAQTAAASSLHQASNHT 238
              ....|.||:.|   ..|......::..              |.|....||.:....:| |...
Zfish   101 GLLSQKAEGNMEVMEKPSGKSRTDDIKME--------------TTSAIKQQTNSTQRQNQ-SQPQ 150

  Fly   239 FYPWMAIAGECPEDPTKSKIRSDLTQYGGISTDMGKRYSESLAGSLLPDWLGTNGLRRRGRQTYT 303
            .||||          ||..:..:                             ::|  :|.|.:||
Zfish   151 IYPWM----------TKLHMSHE-----------------------------SDG--KRSRTSYT 174

  Fly   304 RYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKKE 353
            ||||||||||||.|.|||||||||:|:.|||.||||||||||||||.||:
Zfish   175 RYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKWKKD 224

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ubx	NP_536752.1	Homeobox	299..352	CDD:395001	43/52 (83%)
hoxc5a	NP_571219.2	Homeobox	169..222	CDD:278475	43/52 (83%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000007
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	LDO	PTHR45659
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	4	4.010