Protein Alignment Ubx and Hoxb3

DIOPT Version :9

• Sequence 1: NP_536752.1
• Gene: Ubx / 42034
• FlyBaseID: FBgn0003944
• Length: 389
• Species: Drosophila melanogaster
• Sequence 2: NP_001100512.1
• Gene: Hoxb3 / 303488
• RGDID: 1310780
• Length: 429
• Species: Rattus norvegicus
• Alignment Length: 358
• Identity: 94/358 - (26%)
• Similarity: 121/358 - (33%)
• Gaps: 134/358 - (37%)

  Fly    23 MGSGGHHDQTASAAAAAYRGFPLSLGMS-------PY-ANHHLQRTTQDSPYDASITAACN-KIY 78
            |....::|.||:|....|..:|.|.|..       |: |..||:...|.|        ||: :..
  Rat     1 MQKATYYDNTAAALFGGYSSYPGSNGFGYDGPPQPPFQAATHLEGDYQRS--------ACSLQSL 57

  Fly    79 GDGAGAYKQDCLNIKADAVNGYKDIWNTGGSNGGGGGGGGGGGGGAGGTGGAGNANGGNAANANG 143
            |:.|.       :.|:..:||  .....|.:........|.....|..|....|:|.|...:.:|
  Rat    58 GNAAP-------HAKSKELNG--SCMRPGLAPEPLPAPPGSPPPSAAPTSTTSNSNNGGGPSKSG 113

  Fly   144 QNNPAGGMPVRPSAC---------------TPDSRVGGYLDTSGGSPVSHRGGSAGGNVSVSGGN 193
                       |..|               ..:||....|..|  ||.:..|...|      ||.
  Rat   114 -----------PPKCGASSNSTLTKQIFPWMKESRQTSKLKNS--SPGTAEGCGGG------GGG 159

  Fly   194 GNAGGVQSGVGVAGAGTAWNANCTISGAAAQTAAASSLHQASNHTFYPWMAIAGECPEDPTKSKI 258
            |..||..||.|.:|.|
  Rat   160 GGGGGSSSGGGGSGGG------------------------------------------------- 175

  Fly   259 RSDLTQYGGISTDMGKRYSESLAGSLLPDWLGTNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRR 323
                   ||..:..|...|                  :|.|..||..|.:|||||||.|.||.|.
  Rat   176 -------GGDKSPPGSAAS------------------KRARTAYTSAQLVELEKEFHFNRYLCRP 215

  Fly   324 RRIEMAHALCLTERQIKIWFQNRRMKLKKEIQA 356
            ||:|||:.|.|:||||||||||||||.||:.:|
  Rat   216 RRVEMANLLNLSERQIKIWFQNRRMKYKKDQKA 248

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ubx	NP_536752.1	Homeobox	299..352	CDD:395001	36/52 (69%)
Hoxb3	NP_001100512.1	Homeobox	191..244	CDD:395001	36/52 (69%)
		DUF4074	365..427	CDD:404218

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0489
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.810