DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ubx and hoxb5a

DIOPT Version :9

Sequence 1:NP_536752.1 Gene:Ubx / 42034 FlyBaseID:FBgn0003944 Length:389 Species:Drosophila melanogaster
Sequence 2:NP_571176.2 Gene:hoxb5a / 30317 ZFINID:ZDB-GENE-980526-70 Length:275 Species:Danio rerio


Alignment Length:316 Identity:99/316 - (31%)
Similarity:130/316 - (41%) Gaps:95/316 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 ADAVN-GYKDIWNTGGSNGGGGGGGGGG-------GGGAGGTGGAGNANGGNAANANGQNNPAGG 150
            :.|:| .|:|   :|..:.|..|....|       ....|..|..|:       |:....:||..
Zfish    28 SSAMNASYRD---SGTMHSGSYGYNYNGMDLSVNRSTSTGHFGAVGD-------NSRVFQSPAPE 82

  Fly   151 MPVR-PSACT-------PDSRVGGYLDTSGGSPVSHRGGSAGGNVSVSGGNGNAGGVQSGVGVAG 207
            ...| ||:|:       |.|. ...|...|.||.|.:..:..||      |.|:           
Zfish    83 TRFRQPSSCSLASPEPLPCSN-SESLGPKGSSPPSDQSTTTAGN------NLNS----------- 129

  Fly   208 AGTAWNANCT-ISGAAAQTAAASSLHQASNHTFYPWMAIAGECPEDPTKSKIRSDLTQYGGISTD 271
                 |.:.| |..|:|.:....:.|:|:|           ..|....|.:.         .:|.
Zfish   130 -----NTHFTEIDEASASSETEEASHRANN-----------SAPRTQQKQET---------TATS 169

  Fly   272 MGKRYSESLAGSLLP---------DWLGTNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIE 327
            .....|:..|..:.|         |..|.:|  :|.|..||||||||||||||.|.|||||||||
Zfish   170 TTSATSDGQAPQIFPWMRKLHISHDMTGPDG--KRARTAYTRYQTLELEKEFHFNRYLTRRRRIE 232

  Fly   328 MAHALCLTERQIKIWFQNRRMKLKKEIQAIKELNEQEKQAQAQKAAAAAAAAAAVQ 383
            :||||||:||||||||||||||.||:              ...|:.:.|.|.:|.|
Zfish   233 IAHALCLSERQIKIWFQNRRMKWKKD--------------NKLKSMSLATAGSAFQ 274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UbxNP_536752.1 Homeobox 299..352 CDD:395001 45/52 (87%)
hoxb5aNP_571176.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 70..181 32/160 (20%)
Antp-type hexapeptide 182..187 1/4 (25%)
Homeobox 204..256 CDD:278475 45/51 (88%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45659
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.910

Return to query results.
Submit another query.