Protein Alignment Ubx and Dbx1

DIOPT Version :10

• Sequence 1: NP_536752.1
• Gene: Ubx / 42034
• FlyBaseID: FBgn0003944
• Length: 389
• Species: Drosophila melanogaster
• Sequence 2: NP_001009644.1
• Gene: Dbx1 / 292934
• RGDID: 1308896
• Length: 335
• Species: Rattus norvegicus
• Alignment Length: 232
• Identity: 62/232 - (26%)
• Similarity: 94/232 - (40%)
• Gaps: 56/232 - (24%)

  Fly   154 RPSACTPDSRVGGYLDTSGGSPVSHRGGSAGGNVSVSGGNGNAGGVQSGVGVAGAGTAWNANCTI 218
            ||....|.|     :.|:..||......:|   ::.||        .|.:|..|:|:.
  Rat    49 RPPTYLPRS-----IPTASLSPPRQEAPTA---LADSG--------TSDLGSPGSGSR------- 90

  Fly   219 SGAAAQTAAASSLHQASNHTFYPW--MAIAGECPEDPTKSKI------RSDLTQY--GGISTDMG 273
            .|::.|||    |..||..||..:  .||....|...|...:      ::....|  |.....:.
  Rat    91 RGSSPQTA----LSPASEPTFLKFGVNAILSSAPRRETSPALLQSPPPKTFAFPYFEGSFQPFIR 151

  Fly   274 KRYSESLAGSLLP-----DW-LGTNGLRRRG---RQTYTRYQTLELEKEFHTNHYLTRRRRIEMA 329
            ..|..: :.|::|     .| |...|..|||   |..::..|...|||.|....|:::..|.::|
  Rat   152 SSYFPA-SSSVVPIPGTFSWPLAARGKPRRGMLRRAVFSDVQRKALEKTFQKQKYISKPDRKKLA 215

  Fly   330 HALCLTERQIKIWFQNRRMKLKKEIQAIKELNEQEKQ 366
            ..|.|.:.|:||||||||||.:         |.:|::
  Rat   216 SKLGLKDSQVKIWFQNRRMKWR---------NSKERE 243

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ubx	NP_536752.1	Homeodomain	296..352	CDD:459649	25/58 (43%)
Dbx1	NP_001009644.1	PRK12323	<49..182	CDD:481241	37/160 (23%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	56..102		16/72 (22%)
		Homeodomain	184..238	CDD:459649	22/62 (35%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	240..335		1/4 (25%)