DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubx and GBX1

DIOPT Version :9

Sequence 1:NP_536752.1 Gene:Ubx / 42034 FlyBaseID:FBgn0003944 Length:389 Species:Drosophila melanogaster
Sequence 2:NP_001092304.1 Gene:GBX1 / 2636 HGNCID:4185 Length:363 Species:Homo sapiens


Alignment Length:351 Identity:94/351 - (26%)
Similarity:124/351 - (35%) Gaps:118/351 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 GGGGGGGGGGGGGAGGTGGAGNANGGNAANANGQNNPAGG----------MPVRPSACTPDSRVG 165
            |||...||.||||.||.|.|.:.:     :..|...|..|          ||.|| ...|.:...
Human     5 GGGSAPGGNGGGGGGGPGTAFSID-----SLIGPPPPRSGHLLYTGYPMFMPYRP-LVLPQALAP 63

  Fly   166 GYLDTSGGSPVSHRGGSAGGNVSV-SGGNGNAGGVQSGVGVAGA-------GTAWNANCTISGAA 222
            ..| .:|..|::.....||...:. ..|.|.|  |.|.|.:..|       ..|:.....::.||
Human    64 APL-PAGLPPLAPLASFAGRLTNTFCAGLGQA--VPSMVALTTALPSFAEPPDAFYGPQELAAAA 125

  Fly   223 AQTAAASSLHQAS---------------------------------NHTFYPWMAIAGECPEDPT 254
            |..||.::.:...                                 :.||          |..|.
Human   126 AAAAATAARNNPEPGGRRPEGGLEADELLPAREKVAEPPPPPPPHFSETF----------PSLPA 180

  Fly   255 KSKIRSDLTQ------------------YGGISTDMGKRYSESLAGS---------LLPDWLGT- 291
            :.|:.|...:                  .||.|.|.|  :.:|.||.         .|...||| 
Human   181 EGKVYSSDEEKLEASAGDPAGSEQEEEGSGGDSEDDG--FLDSSAGGPGALLGPKPKLKGSLGTG 243

  Fly   292 --------------NGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIW 342
                          .|..||.|..:|..|.||||||||...||:...|.::||||.|:|.|:|||
Human   244 AEEGAPVTAGVTAPGGKSRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIW 308

  Fly   343 FQNRRMKLKKEIQAIKELNEQEKQAQ 368
            |||||.|.|:    ||..|...:..:
Human   309 FQNRRAKWKR----IKAGNVSSRSGE 330

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UbxNP_536752.1 Homeobox 299..352 CDD:395001 30/52 (58%)
GBX1NP_001092304.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..31 13/30 (43%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 128..265 23/148 (16%)
Homeobox 264..317 CDD:306543 30/52 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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