DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubx and VAX2

DIOPT Version :10

Sequence 1:NP_536752.1 Gene:Ubx / 42034 FlyBaseID:FBgn0003944 Length:389 Species:Drosophila melanogaster
Sequence 2:NP_036608.1 Gene:VAX2 / 25806 HGNCID:12661 Length:290 Species:Homo sapiens


Alignment Length:192 Identity:54/192 - (28%)
Similarity:81/192 - (42%) Gaps:32/192 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   190 SGGNGNAGGVQSGVGVAGAGTAWNANCTISGAAAQTAAASSLHQASNHTFYPWMAIAGECPE--- 251
            |||.|...|.:||.|...|....::...::|.:| ::.|.|....::....|....|..|..   
Human    18 SGGGGGRCGDRSGAGDLRADGGGHSPTEVAGTSA-SSPAGSRESGADSDGQPGPGEADHCRRILV 81

  Fly   252 DPTKSKIRSDLTQYGGISTDMGKRYSESLAGSLLPDWLGTNGLRRRGRQTYTRYQTLELEKEFHT 316
            ...|..|| ::....|:..|..|                      |.|.::|..|...||.||..
Human    82 RDAKGTIR-EIVLPKGLDLDRPK----------------------RTRTSFTAEQLYRLEMEFQR 123

  Fly   317 NHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKKEIQAIKELNEQEKQAQAQKAAAAAAA 378
            ..|:..|.|.|:|..|.|:|.|:|:||||||.|.||:     :..:.||:|.:..:.|.|.:
Human   124 CQYVVGRERTELARQLNLSETQVKVWFQNRRTKQKKD-----QSRDLEKRASSSASEAFATS 180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UbxNP_536752.1 Homeodomain 296..352 CDD:459649 25/55 (45%)
VAX2NP_036608.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..75 15/57 (26%)
Homeodomain 103..159 CDD:459649 26/77 (34%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 205..240
Blue background indicates that the domain is not in the aligned region.

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