DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubx and Vax2

DIOPT Version :10

Sequence 1:NP_536752.1 Gene:Ubx / 42034 FlyBaseID:FBgn0003944 Length:389 Species:Drosophila melanogaster
Sequence 2:NP_036042.1 Gene:Vax2 / 24113 MGIID:1346018 Length:292 Species:Mus musculus


Alignment Length:29 Identity:8/29 - (27%)
Similarity:18/29 - (62%) Gaps:0/29 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 ILLTNLAFVLNVVYSTLVVIGYKSKTIKE 68
            ::|..|:.||.|....|:|..::|:.:::
Mouse   230 VILLALSAVLGVAVVALLVYEFRSRCLRK 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UbxNP_536752.1 Homeodomain 296..352 CDD:459649
Vax2NP_036042.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..74
Homeodomain 103..159 CDD:459649
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 207..242 4/11 (36%)
Blue background indicates that the domain is not in the aligned region.

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