DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ubx and Gbx1

DIOPT Version :9

Sequence 1:NP_536752.1 Gene:Ubx / 42034 FlyBaseID:FBgn0003944 Length:389 Species:Drosophila melanogaster
Sequence 2:NP_056554.1 Gene:Gbx1 / 231044 MGIID:95667 Length:418 Species:Mus musculus


Alignment Length:338 Identity:93/338 - (27%)
Similarity:122/338 - (36%) Gaps:100/338 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 GGGGGGGGGGGAGGTGGAGNANGGNAANANGQNNPAGG----------MPVR----PSACTPDSR 163
            |||..||.||.:||.|.|.:.:     :..|...|..|          ||.|    |.|..|   
Mouse    66 GGGAPGGSGGSSGGPGAAFSID-----SLIGPPPPRSGHLLYTGYPMFMPYRPLVLPQALAP--- 122

  Fly   164 VGGYLDTSGGSPVSHRGGSAGGNVSVSGGNGNAGGVQSGVGVAGA-------GTAWNANCTISGA 221
                .....|.|......|..|.:|.:...|....|.|.|.:..|       ..|:.....::.|
Mouse   123 ----APLPAGLPPLAPLASFAGRLSNTFCAGLGQAVPSMVALTTALPSFAEPPDAYYGPPELAAA 183

  Fly   222 AAQTAAASSLHQASNHT-----------------------------FYPWMAIAG---------- 247
            ||.||:.|:...|:..|                             .:|.:...|          
Mouse   184 AASTASRSNPEPAARRTDGALDAEELLPAREKVTEPPPPPPPHFSETFPSLPAEGKVYSSDEEKL 248

  Fly   248 ECPE-DPTKSKIRSDLTQYGGISTDMGKRYSESLAGSLL---PDWLGT----------------- 291
            |.|. ||..|:...:.:  ||.|.|.....|....|:||   |...|:                 
Mouse   249 EPPAGDPAGSEQEEEGS--GGDSEDSFLDSSAGGPGALLGPKPKLKGSPGTGAEEGTPVATGVTT 311

  Fly   292 -NGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKKEIQ 355
             .|..||.|..:|..|.||||||||...||:...|.::||||.|:|.|:||||||||.|.|:   
Mouse   312 PGGKSRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWKR--- 373

  Fly   356 AIKELNEQEKQAQ 368
             ||..|...:..:
Mouse   374 -IKAGNVSSRSGE 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UbxNP_536752.1 Homeobox 299..352 CDD:395001 30/52 (58%)
Gbx1NP_056554.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..90 11/28 (39%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 214..320 20/107 (19%)
Homeobox 319..372 CDD:278475 30/52 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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