DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubx and EMX1

DIOPT Version :10

Sequence 1:NP_536752.1 Gene:Ubx / 42034 FlyBaseID:FBgn0003944 Length:389 Species:Drosophila melanogaster
Sequence 2:NP_004088.2 Gene:EMX1 / 2016 HGNCID:3340 Length:290 Species:Homo sapiens


Alignment Length:286 Identity:70/286 - (24%)
Similarity:107/286 - (37%) Gaps:98/286 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   110 NGGGGGGGGGGGGGAGGTGGAGNANGGNAANANGQNNPAGGMPVRPSACTPDSRVGGYLDTSGGS 174
            :||.|||.||||.|:.....|                 |...|:||:|                 
Human    52 DGGTGGGTGGGGAGSHLLAAA-----------------ASEEPLRPTA----------------- 82

  Fly   175 PVSHRGGSAGGNVSVSGGNGNAGGVQSGVGVAGAGTAWNANCTISGAAAQTAAASSLHQA----- 234
             :::...||.....|||....|        .||||.:......:....|....|.::|.|     
Human    83 -LNYPHPSAAEAAFVSGFPAAA--------AAGAGRSLYGGPELVFPEAMNHPALTVHPAHQLGA 138

  Fly   235 -----------SNHT----FYPWMAIAGECPEDPTKSKIRSDLTQYGGISTDMGKRYSESLAGSL 284
                       :.|.    ||||:              :|:..         .|.|:.   |..:
Human   139 SPLQPPHSFFGAQHRDPLHFYPWV--------------LRNRF---------FGHRFQ---ASDV 177

  Fly   285 LPDWLGTNG----LRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQN 345
            ..|.|..:|    ..:|.|..::..|.|.||:.|..|||:....|.::|.:|.|:|.|:|:||||
Human   178 PQDGLLLHGPFARKPKRIRTAFSPSQLLRLERAFEKNHYVVGAERKQLAGSLSLSETQVKVWFQN 242

  Fly   346 RRMKLKKEIQAIKELNEQEKQAQAQK 371
            ||.|.|::     :|.|:..:::.:|
Human   243 RRTKYKRQ-----KLEEEGPESEQKK 263

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UbxNP_536752.1 Homeodomain 296..352 CDD:459649 24/55 (44%)
EMX1NP_004088.2 Homeodomain 193..249 CDD:459649 24/55 (44%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 249..290 3/20 (15%)

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