Protein Alignment Ubx and Msx3

DIOPT Version :10

• Sequence 1: NP_536752.1
• Gene: Ubx / 42034
• FlyBaseID: FBgn0003944
• Length: 389
• Species: Drosophila melanogaster
• Sequence 2: NP_034966.1
• Gene: Msx3 / 17703
• MGIID: 106587
• Length: 204
• Species: Mus musculus
• Alignment Length: 250
• Identity: 63/250 - (25%)
• Similarity: 83/250 - (33%)
• Gaps: 91/250 - (36%)

  Fly   159 TPDSRVGGYLDTSGGSPVSHRGGSAGGNVS-------VSGGNGNAGGVQSGVGVAGAGTAWNANC 216
            |.|....| |:..||....|  |....:|.       |.|......||:..:|.:..| ||..
Mouse     5 TFDMNAAG-LEARGGGHTEH--GPLPFSVESLLEAERVPGSESGELGVERPLGASKPG-AWPP-- 63

  Fly   217 TISGAAAQTAAASSLHQASNHTFYPWMAIAGECP---EDPTKSKIRSDLTQYGGISTDMGKRYSE 278
                                       .:|..||   ..|....:|...|
Mouse    64 ---------------------------PVAHSCPPRAPSPPPCTLRKHKT--------------- 86

  Fly   279 SLAGSLLPDWLGTNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWF 343
                            .|:.|..:|..|.|.||::||...||:...|.|.:.:|.|||.|:||||
Mouse    87 ----------------NRKPRTPFTTAQLLALERKFHQKQYLSIAERAEFSSSLSLTETQVKIWF 135

  Fly   344 QNRRMKLKKEIQAIKELNEQEKQAQAQKAAAAAA------------AAAAVQGGH 386
            ||||.|.|:..:|     |.||...|.|....||            ::||..||:
Mouse   136 QNRRAKAKRLQEA-----ELEKLKLAAKPLLPAAFALPFPLGTQLHSSAATFGGN 185

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ubx	NP_536752.1	Homeodomain	296..352	CDD:459649	27/55 (49%)
Msx3	NP_034966.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	39..89		14/110 (13%)
		Homeodomain	88..144	CDD:459649	27/55 (49%)