Protein Alignment Ubx and Msx2

DIOPT Version :10

• Sequence 1: NP_536752.1
• Gene: Ubx / 42034
• FlyBaseID: FBgn0003944
• Length: 389
• Species: Drosophila melanogaster
• Sequence 2: NP_038629.2
• Gene: Msx2 / 17702
• MGIID: 97169
• Length: 267
• Species: Mus musculus
• Alignment Length: 254
• Identity: 59/254 - (23%)
• Similarity: 85/254 - (33%)
• Gaps: 62/254 - (24%)

  Fly   123 GAGGTGGAGNANGGNAANANGQNNPAGGMPVRPSACTPDSRVGGYLDTSGGSPVSHRGGSAGGNV 187
            |.....|.|...||...:|..:......:|....|...|.:      ....||
Mouse    17 GPAVLAGPGPGPGGAEGSAEERRVKVSSLPFSVEALMSDKK------PPKESP------------ 63

  Fly   188 SVSGGNGNAGGVQSGVGVAGAGTAWNANCTISGAAAQTAAASSLHQASNHTFYPWMAIAGECPE- 251
            :|.....:||.|...:.:.|.|.   .:....|...:....:|:...::....||:...|....
Mouse    64 AVPPDCASAGAVLRPLLLPGHGV---RDAHSPGPLVKPFETASVKSENSEDGAPWIQEPGRYSPP 125

  Fly   252 ----DPTKSKIRSDLTQYGGISTDMGKRYSESLAGSLLPDWLGTNGLRRRGRQTYTRYQTLELEK 312
                .||...:|...|                               .|:.|..:|..|.|.||:
Mouse   126 PRHMSPTTCTLRKHKT-------------------------------NRKPRTPFTTSQLLALER 159

  Fly   313 EFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKKEIQAIKELNEQEKQAQAQK 371
            :|....||:...|.|.:.:|.|||.|:||||||||.|.|:..:|     |.||...|.|
Mouse   160 KFRQKQYLSIAERAEFSSSLNLTETQVKIWFQNRRAKAKRLQEA-----ELEKLKMAAK 213

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ubx	NP_536752.1	Homeodomain	296..352	CDD:459649	26/55 (47%)
Msx2	NP_038629.2	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..42		6/24 (25%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	104..132		3/27 (11%)
		Homeodomain	143..199	CDD:459649	26/55 (47%)