DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubx and Meox1

DIOPT Version :10

Sequence 1:NP_536752.1 Gene:Ubx / 42034 FlyBaseID:FBgn0003944 Length:389 Species:Drosophila melanogaster
Sequence 2:XP_036012267.1 Gene:Meox1 / 17285 MGIID:103220 Length:271 Species:Mus musculus


Alignment Length:309 Identity:64/309 - (20%)
Similarity:91/309 - (29%) Gaps:113/309 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 GFYGHPHQATGMAMGSGGH-------HDQTASAAAAAYRGFPLS-LGMSPYANHHLQRTTQDSPY 66
            |...:||.....|.|...:       |.::...|.|||..|..| |..:|   |.|.||      
Mouse    20 GCLRNPHSEDSSASGLSHYPPTPFSFHQKSDFPATAAYPDFSASCLAATP---HSLPRT------ 75

  Fly    67 DASITAACNKIYGDGAGAYKQDCLNIKADAVNGYKDIWNTGGSNGG-----GGGG-----GGGGG 121
                    .:|:.:...|:.|             ...|:...|..|     |..|     |.|..
Mouse    76 --------ERIFNEQHPAFPQ-------------TPDWHFPISEAGQRLNLGPAGSAREMGAGSP 119

  Fly   122 GGAGGTGGAGN--ANGGNAAN-----ANGQNNPAGGMPVRPSACTPDSRVGGYLDTSGGSPVSHR 179
            |...||.|.|.  ...|..||     ::.:.....|..:.|.   |:..|    :|.       .
Mouse   120 GLVDGTAGLGEDCMVLGTIANETEKKSSRRKKERSGQSLVPE---PEDEV----ETC-------E 170

  Fly   180 GGSAGGNVSVSGGNGNAGGVQSGVGVAGAGTAWNANCTISGAAAQTAAASSLHQASNHTF-YPWM 243
            ||||              .|.:|.|..|.|.     |:.|....:.:...:..:...... :|  
Mouse   171 GGSA--------------CVPTGAGPRGWGL-----CSFSKFRVRCSKDQNQERLKEPPLQFP-- 214

  Fly   244 AIAGECPEDPTKS-----------KIRSDLTQYGGISTDMGKRYSESLA 281
                  |..||.|           .:|.::.||.|     ...:.|.||
Mouse   215 ------PPGPTLSHLWTHPGQPAHTLRCEVAQYVG-----ALNFPEGLA 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UbxNP_536752.1 Homeodomain 296..352 CDD:459649
Meox1XP_036012267.1 None
Blue background indicates that the domain is not in the aligned region.

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