Protein Alignment Ubx and ceh-12

DIOPT Version :10

• Sequence 1: NP_536752.1
• Gene: Ubx / 42034
• FlyBaseID: FBgn0003944
• Length: 389
• Species: Drosophila melanogaster
• Sequence 2: NP_491693.1
• Gene: ceh-12 / 172255
• WormBaseID: WBGene00000436
• Length: 180
• Species: Caenorhabditis elegans
• Alignment Length: 158
• Identity: 49/158 - (31%)
• Similarity: 73/158 - (46%)
• Gaps: 43/158 - (27%)

  Fly   212 WNANCT-----ISGAAAQTAAASSLHQASNHTFYPWMAIAGECPEDPTKSKIRSDLTQYGGISTD 271
            ::.:|:     ::..|||.||.:||..:.:.:..|...:              :.|:.|
 Worm    36 YSTSCSEELMKMAAKAAQFAAQASLENSFSSSTSPTSTV--------------TPLSAY------ 80

  Fly   272 MGKRYSESLAGSLLP---DWLGTN---------GLRRRGRQTYTRYQTLELEKEFHTNHYLTRRR 324
                  .||...:||   |.|...         |..||.|..::..|.::|||:|..|.||:|.|
 Worm    81 ------TSLVQPVLPLIYDHLALTYSVNAWQAWGKMRRPRTAFSSEQLVQLEKQFSDNRYLSRPR 139

  Fly   325 RIEMAHALCLTERQIKIWFQNRRMKLKK 352
            |.::|..|.|:|.||||||||||||.|:
 Worm   140 RYQLAQQLSLSETQIKIWFQNRRMKNKR 167

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ubx	NP_536752.1	Homeodomain	296..352	CDD:459649	30/55 (55%)
ceh-12	NP_491693.1	Homeodomain	111..167	CDD:459649	30/55 (55%)