Protein Alignment Ubx and Hoxd9

DIOPT Version :10

• Sequence 1: NP_536752.1
• Gene: Ubx / 42034
• FlyBaseID: FBgn0003944
• Length: 389
• Species: Drosophila melanogaster
• Sequence 2: NP_038583.1
• Gene: Hoxd9 / 15438
• MGIID: 96210
• Length: 339
• Species: Mus musculus
• Alignment Length: 264
• Identity: 88/264 - (33%)
• Similarity: 111/264 - (42%)
• Gaps: 66/264 - (25%)

  Fly   108 GSNGGGGGGGGGGGGGAGGTGGAGNANGGNAANANGQN---NPAGGMPVRPSACTPDSRVGGYLD 169
            |..||.|||||.||||.||.|...:..|    .|||::   .|..|....|:|.:..|.    ..
Mouse   113 GFPGGAGGGGGSGGGGGGGPGPVPSPGG----PANGRHYGIKPETGAAPAPAAASTSSS----SS 169

  Fly   170 TSGGSPVSHRGGSAGGNVSVSGG----------------NGNAGGVQSGVGVAGAGTAWNANCTI 218
            ||..|.......||......|||                .||..||..|.|....|::..:.|
Mouse   170 TSSSSSSKRTECSAARESQGSGGPEFPCNSFLRDKAAAATGNGPGVGIGTGPGAVGSSEPSAC-- 232

  Fly   219 SGAAAQTAAASSLHQASNHTFYPWMAIAGECPEDPTKSKIRSDLTQYGGISTDMGKRYSESLAGS 283
                            |:|. .|..::..|..:.|...:.:.|                   ..:
Mouse   233 ----------------SDHP-SPGCSLKEEEKQPPQPPQQQLD-------------------PNN 261

  Fly   284 LLPDWLGTNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRM 348
            ...:|:.....|:: |..||:||||||||||..|.||||.||.|:|..|.|||||:|||||||||
Mouse   262 PAANWIHARSTRKK-RCPYTKYQTLELEKEFLFNMYLTRDRRYEVARILNLTERQVKIWFQNRRM 325

  Fly   349 KLKK 352
            |:||
Mouse   326 KMKK 329

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ubx	NP_536752.1	Homeodomain	296..352	CDD:459649	38/55 (69%)
Hoxd9	NP_038583.1	Hox9_act	1..>153	CDD:461369	20/43 (47%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	114..198		31/91 (34%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	211..263		13/89 (15%)
		Homeodomain	273..324	CDD:459649	35/51 (69%)