Protein Alignment Ubx and Hoxd4

DIOPT Version :10

• Sequence 1: NP_536752.1
• Gene: Ubx / 42034
• FlyBaseID: FBgn0003944
• Length: 389
• Species: Drosophila melanogaster
• Sequence 2: NP_034599.2
• Gene: Hoxd4 / 15436
• MGIID: 96208
• Length: 250
• Species: Mus musculus
• Alignment Length: 258
• Identity: 83/258 - (32%)
• Similarity: 111/258 - (43%)
• Gaps: 82/258 - (31%)

  Fly   165 GGYLDTSGGSPVSHRGGSAGGNVSVSG-------GNGNAGGVQSGVGVA-----------GAGTA 211
            ||||...|..  .:..|:.|.:...||       |....||...|.|.|           |.|:.
Mouse    26 GGYLGEQGAD--YYGSGAQGADFQPSGLYPRPDFGEQPFGGGGPGPGSALPARGHGQEPSGPGSH 88

  Fly   212 WNA---NC------TISGAAA--------QTAAASSLHQASNHTFYPWMAIAGECPEDPTKSKIR 259
            :.|   .|      .:.||.|        |....::|.|.:  ..||||            .|:.
Mouse    89 YGAPGERCPAPPPAPLPGARACSQPTGPKQPPPGTALKQPA--VVYPWM------------KKVH 139

  Fly   260 SDLTQYGGISTDMGKRYSESLAGSLLPDWLGTNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRR 324
                                 ..|:.|::  |.|..:|.|..|||.|.||||||||.|.||||||
Mouse   140 ---------------------VNSVNPNY--TGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRR 181

  Fly   325 RIEMAHALCLTERQIKIWFQNRRMKLKKEIQAIKELNEQEKQAQAQKAAAAAAAAAAVQGGHL 387
            |||:||.|||:||||||||||||||.||:        .:....:.:.:::::.:::|..|.||
Mouse   182 RIEIAHTLCLSERQIKIWFQNRRMKWKKD--------HKLPNTKGRSSSSSSCSSSAAPGQHL 236

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ubx	NP_536752.1	Homeodomain	296..352	CDD:459649	43/55 (78%)
Hoxd4	NP_034599.2	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	31..126		19/96 (20%)
		Antp-type hexapeptide	131..136		4/16 (25%)
		Homeodomain	153..209	CDD:459649	43/55 (78%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	210..250		4/35 (11%)