Protein Alignment Ubx and Hoxc5

DIOPT Version :10

• Sequence 1: NP_536752.1
• Gene: Ubx / 42034
• FlyBaseID: FBgn0003944
• Length: 389
• Species: Drosophila melanogaster
• Sequence 2: NP_783857.1
• Gene: Hoxc5 / 15424
• MGIID: 96196
• Length: 222
• Species: Mus musculus
• Alignment Length: 233
• Identity: 80/233 - (34%)
• Similarity: 103/233 - (44%)
• Gaps: 58/233 - (24%)

  Fly   134 NGGNAANANGQNNPAGGMPVR----PSACTPDSRVGGYLDTSGGSPVSHRGGSAGGNVSVSG--- 191
            |.|:|:.........||:.:.    |.|  |.:.:.| :|.: .:|.:|....|....:..|
Mouse    26 NYGSASEVQASRYCYGGLDLSITFPPPA--PSNSLHG-VDMA-ANPRAHPDRPACSAAAAPGHAL 86

  Fly   192 GNGNAGGVQSGV-GVAGAGTAWNANCTISG----AAAQTAAASSLHQ-ASNHTFYPWMAIAGECP 250
            |...|..:..|: ....|..|.......||    ..|||...:.|.| .:....||||
Mouse    87 GRDEAAPLNPGMYSQKAARPALEERAKSSGEIKEEQAQTGQPAGLSQPPAPPQIYPWM------- 144

  Fly   251 EDPTKSKIRSDLTQYGGISTDMGKRYSESLAGSLLPDWLGTNGLRRRGRQTYTRYQTLELEKEFH 315
               ||..:..:                             |:|  :|.|.:||||||||||||||
Mouse   145 ---TKLHMSHE-----------------------------TDG--KRSRTSYTRYQTLELEKEFH 175

  Fly   316 TNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKKE 353
            .|.|||||||||:|:.|||.||||||||||||||.||:
Mouse   176 FNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKWKKD 213

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ubx	NP_536752.1	Homeodomain	296..352	CDD:459649	44/55 (80%)
Hoxc5	NP_783857.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	68..141		15/72 (21%)
		Antp-type hexapeptide	140..145		4/14 (29%)
		Homeodomain	156..212	CDD:459649	44/55 (80%)