Protein Alignment Ubx and Hoxc4

DIOPT Version :10

• Sequence 1: NP_536752.1
• Gene: Ubx / 42034
• FlyBaseID: FBgn0003944
• Length: 389
• Species: Drosophila melanogaster
• Sequence 2: NP_038581.2
• Gene: Hoxc4 / 15423
• MGIID: 96195
• Length: 264
• Species: Mus musculus
• Alignment Length: 256
• Identity: 79/256 - (30%)
• Similarity: 105/256 - (41%)
• Gaps: 88/256 - (34%)

  Fly   129 GAGNANGGNAANANGQNNPAGGMPVRPSACTPDSRVGGYLDTSGGSPVSHRGGSAGGNVSVSGGN 193
            |.||:.....|.| |.::|....|:    |.|             :|:|
Mouse    74 GPGNSRAHGPAQA-GHHHPEKSQPL----CEP-------------APLS---------------- 104

  Fly   194 GNAGGVQSGVGVAGAGTAWNANCTISGAAAQTAAASSLHQASNHTFYPWMAIAGECPEDPTKSKI 258
                      |.:.:.:.....|:.......::|||     .....||||            .||
Mouse   105 ----------GTSASPSPAPPACSQPAPDHPSSAAS-----KQPIVYPWM------------KKI 142

  Fly   259 RSDLTQYGGISTDMGKRYSESLAGSLLPDWLGTNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRR 323
            .        :||             :.|::.|  |..:|.|..|||.|.||||||||.|.|||||
Mouse   143 H--------VST-------------VNPNYNG--GEPKRSRTAYTRQQVLELEKEFHYNRYLTRR 184

  Fly   324 RRIEMAHALCLTERQIKIWFQNRRMKLKKEIQAIKELNEQEKQAQAQKAAAAAAAAAAVQG 384
            ||||:||:|||:||||||||||||||.||:    ..|...:.::.....||.:..:||..|
Mouse   185 RRIEIAHSLCLSERQIKIWFQNRRMKWKKD----HRLPNTKVRSAPPAGAAPSTLSAATPG 241

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ubx	NP_536752.1	Homeodomain	296..352	CDD:459649	43/55 (78%)
Hoxc4	NP_038581.2	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	19..130		15/99 (15%)
		Antp-type hexapeptide	135..140		4/16 (25%)
		Homeodomain	157..213	CDD:459649	43/55 (78%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	214..264		6/32 (19%)