Protein Alignment Ubx and Hoxc12

DIOPT Version :10

• Sequence 1: NP_536752.1
• Gene: Ubx / 42034
• FlyBaseID: FBgn0003944
• Length: 389
• Species: Drosophila melanogaster
• Sequence 2: NP_034593.1
• Gene: Hoxc12 / 15421
• MGIID: 96194
• Length: 280
• Species: Mus musculus
• Alignment Length: 331
• Identity: 85/331 - (25%)
• Similarity: 123/331 - (37%)
• Gaps: 130/331 - (39%)

  Fly    40 YRGFPLSLGMSPYANHHLQRTTQDSPYDASITAACNKIYGDGAGAYKQDCLNIKADAVNGYKDIW 104
            |.|.|:||      |....||.:.:..:            |..|.|::.|
Mouse    68 YLGSPVSL------NPPFGRTCELARVE------------DSKGYYREPC--------------- 99

  Fly   105 NTGGSNGGGGG-----GGGGGGGGAGGTGGAGNANGGNAANANGQNNPAGGMPVRPSACTPDSRV 164
                :.|||||     .|...|.|.|.              |..|..|:|     |.|      :
Mouse   100 ----AEGGGGGLKREERGREPGAGPGA--------------ALLQLEPSG-----PPA------L 135

  Fly   165 GGYLD--TSGGSPVSHRGGSAGGNVSVSGGNGNAGGVQSGVGVAGAGTAWNANCTISGAAAQTAA 227
            |...|  .|||                 ||:|:.|....           ..:|    .:.::.:
Mouse   136 GFKYDYTASGG-----------------GGDGSTGPPHD-----------PPSC----QSLESDS 168

  Fly   228 ASSLHQASNHTFYPWMAIAGECPEDPTKSKIRSDLTQYGGISTDMGKRYSESLAGSLLPDWLGTN 292
            :|||....|.:     |.||    ||  ..:.|.|...||:|.          :|:   .|...:
Mouse   169 SSSLLNEGNKS-----ASAG----DP--GSLVSPLNPGGGLSA----------SGA---PWYPIH 209

  Fly   293 GLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKKEIQAI 357
            ...|:.|:.|::.|..|||.||..|.::||:||.|::..|.|:::|:||||||||||.|:.:
Mouse   210 SRSRKKRKPYSKLQLAELEGEFLVNEFITRQRRRELSDRLNLSDQQVKIWFQNRRMKKKRLL--- 271

  Fly   358 KELNEQ 363
              |.||
Mouse   272 --LREQ 275

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ubx	NP_536752.1	Homeodomain	296..352	CDD:459649	28/55 (51%)
Hoxc12	NP_034593.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	95..212		43/216 (20%)
		Homeodomain	213..269	CDD:459649	28/55 (51%)