Protein Alignment Ubx and Hoxa9

DIOPT Version :10

• Sequence 1: NP_536752.1
• Gene: Ubx / 42034
• FlyBaseID: FBgn0003944
• Length: 389
• Species: Drosophila melanogaster
• Sequence 2: NP_034586.1
• Gene: Hoxa9 / 15405
• MGIID: 96180
• Length: 271
• Species: Mus musculus
• Alignment Length: 297
• Identity: 88/297 - (29%)
• Similarity: 109/297 - (36%)
• Gaps: 109/297 - (36%)

  Fly   127 TGGAGN------ANGGNAANANGQNNPAG---GMPVRPSACT---PDSRVGGYLDTSGGSPVSHR 179
            ||..||      ..|.:||:..|....|.   |.|.|.:|..   ||.           ||.|
Mouse     4 TGALGNYYVDSFLLGADAADELGAGRYAPGTLGQPPRQAAALAEHPDF-----------SPCS-- 55

  Fly   180 GGSAGGNVSVSGGNGNAGGVQSGVGVAGAGTAWNANCTISGAAAQTAAASSLHQASNHTFYPWMA 244
                               .||...|.||  :||   .:..|.|....|:..|...:...:|...
Mouse    56 -------------------FQSKAAVFGA--SWN---PVHAAGANAVPAAVYHHHHHPYVHPQAP 96

  Fly   245 IAGECPE--------DPTKSKI---------------------RSD----------LTQY--GGI 268
            :|...|:        :||...:                     |.|          ||.|  |..
Mouse    97 VAAAAPDGRYMRSWLEPTPGALSFAGLPSSRPYGIKPEPLSARRGDCPTLDTHTLSLTDYACGSP 161

  Fly   269 STDMGKRYSESL----------AGSLLP--------DWLGTNGLRRRGRQTYTRYQTLELEKEFH 315
            ..|..|:.||..          .|...|        :||.....|:: |..||::|||||||||.
Mouse   162 PVDREKQPSEGAFSENNAENESGGDKPPIDPNNPAANWLHARSTRKK-RCPYTKHQTLELEKEFL 225

  Fly   316 TNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKK 352
            .|.||||.||.|:|..|.|||||:||||||||||:||
Mouse   226 FNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKK 262

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ubx	NP_536752.1	Homeodomain	296..352	CDD:459649	37/55 (67%)
Hoxa9	NP_034586.1	Hox9_act	1..192	CDD:461369	46/224 (21%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	154..197		9/42 (21%)
		Homeodomain	206..262	CDD:459649	38/56 (68%)