DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ubx and Hoxa5

DIOPT Version :9

Sequence 1:NP_536752.1 Gene:Ubx / 42034 FlyBaseID:FBgn0003944 Length:389 Species:Drosophila melanogaster
Sequence 2:NP_034583.1 Gene:Hoxa5 / 15402 MGIID:96177 Length:270 Species:Mus musculus


Alignment Length:312 Identity:104/312 - (33%)
Similarity:135/312 - (43%) Gaps:79/312 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 YGDGAGAYKQDCLNIKADAVNGYKDIWNTGGSNGGGGGGGGGGGGGAGGTGGAGNANGGNAAN-- 140
            |||.:...:|            ::|   :...:.|..|.|..|...:.|..|:|:...|..|.  
Mouse    24 YGDHSSVSEQ------------FRD---SASMHSGRYGYGYNGMDLSVGRSGSGHFGSGERARSY 73

  Fly   141 -ANGQNNPAGGMPVRPSACT----PDSRVGGYLDTSGGSPVSHRGGSAGGNVSVSGGNGNAGGV- 199
             |.....||.....:|:..|    ||......:..|.||...|.|.::.||  .||.:.|||.. 
Mouse    74 AAGASAAPAEPRYSQPATSTHSPPPDPLPCSAVAPSPGSDSHHGGKNSLGN--SSGASANAGSTH 136

  Fly   200 ---QSGVGVAGAGTAWNANCTISGAAAQTAAASSLHQASNHTFYPWMAIAGECPEDPTKSKIRSD 261
               :.|||.|.|... :|..:...|.||:..:.:  ..:....||||          .|..|..|
Mouse   137 ISSREGVGTASAAEE-DAPASSEQAGAQSEPSPA--PPAQPQIYPWM----------RKLHISHD 188

  Fly   262 LTQYGGISTDMGKRYSESLAGSLLPDWLGTNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRI 326
                     ::|                |..|  :|.|..||||||||||||||.|.||||||||
Mouse   189 ---------NIG----------------GPEG--KRARTAYTRYQTLELEKEFHFNRYLTRRRRI 226

  Fly   327 EMAHALCLTERQIKIWFQNRRMKLKKEIQAIKELNEQEKQAQAQKAAAAAAA 378
            |:||||||:||||||||||||||.||           :.:.::...|||..|
Mouse   227 EIAHALCLSERQIKIWFQNRRMKWKK-----------DNKLKSMSMAAAGGA 267

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UbxNP_536752.1 Homeobox 299..352 CDD:395001 45/52 (87%)
Hoxa5NP_034583.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 75..175 28/104 (27%)
Antp-type hexapeptide 176..181 4/14 (29%)
Homeobox 199..252 CDD:333795 45/52 (87%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 116 1.000 Inparanoid score I4804
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45659
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.960

Return to query results.
Submit another query.