DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubx and Gbx2

DIOPT Version :10

Sequence 1:NP_536752.1 Gene:Ubx / 42034 FlyBaseID:FBgn0003944 Length:389 Species:Drosophila melanogaster
Sequence 2:NP_034392.1 Gene:Gbx2 / 14472 MGIID:95668 Length:348 Species:Mus musculus


Alignment Length:206 Identity:63/206 - (30%)
Similarity:87/206 - (42%) Gaps:46/206 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   192 GNGNAGGVQSGVGVAGAGTAWNA--NCTISGAAAQTAAASSLHQASNHTFYPWMAIAGECP---- 250
            |.||....::....|..|.|:.|  ...::.:||:...||.:.           |:.|:..    
Mouse   134 GGGNFDKAEALQADAEDGKAFLAKEGSLLAFSAAEAVQASLVG-----------AVRGQGKDESK 187

  Fly   251 -EDPTKSK-----IRSDLT---------QYGGISTDMGKRYSES-----LAGSLLPDWLGTNGLR 295
             ||..|.|     :.||:.         |......|.|....|:     .|||..     :.|..
Mouse   188 VEDDPKGKEESFSLESDVDYSSDDNLPGQTAHKEEDPGHALEETPQSGGAAGSTT-----STGKN 247

  Fly   296 RRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKKEIQAIKEL 360
            ||.|..:|..|.||||||||...||:...|.::||||.|:|.|:||||||||.|.|:    :|..
Mouse   248 RRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWKR----VKAG 308

  Fly   361 NEQEKQAQAQK 371
            |...|..:..:
Mouse   309 NANSKTGEPSR 319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UbxNP_536752.1 Homeodomain 296..352 CDD:459649 32/55 (58%)
Gbx2NP_034392.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 59..81
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 111..139 3/4 (75%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 179..251 17/76 (22%)
Homeodomain 248..304 CDD:459649 32/55 (58%)
Blue background indicates that the domain is not in the aligned region.

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