Protein Alignment Ubx and hoxc6

DIOPT Version :10

• Sequence 1: NP_536752.1
• Gene: Ubx / 42034
• FlyBaseID: FBgn0003944
• Length: 389
• Species: Drosophila melanogaster
• Sequence 2: XP_004911991.1
• Gene: hoxc6 / 101733663
• XenbaseID: XB-GENE-478131
• Length: 242
• Species: Xenopus tropicalis
• Alignment Length: 202
• Identity: 74/202 - (36%)
• Similarity: 95/202 - (47%)
• Gaps: 47/202 - (23%)

  Fly   217 TISGAAAQTAAASS----------------LHQASNHTFYPWMAIAGECPEDPTKSKIRSDLTQY 265
            |...|.||....||                .::..::.||....:...|.::......:|.|.|
 Frog    39 TYGAAVAQNRIYSSPFYTPQDNVVFGSSRGPYEYGSNAFYQDKDMLTSCRQNSMGHNTQSSLAQ- 102

  Fly   266 GGISTDMGKRYSESLAGSL-LPDWL-----------------GTNGLRRRGRQTYTRYQTLELEK 312
             ..|::..:...:...||: :..|:                 |....||||||.|:|||||||||
 Frog   103 -DFSSEQSRGNGQEQKGSIQIYPWMQRMNSHSVCLVSDSLGVGYGADRRRGRQIYSRYQTLELEK 166

  Fly   313 EFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKKEIQAIKELNEQEKQAQAQKAAAAAA 377
            |||.|.|||||||||:|:|||||||||||||||||||.|||......|           :....|
 Frog   167 EFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKESNLTSTL-----------SGGTGA 220

  Fly   378 AAAAVQG 384
            ||.::.|
 Frog   221 AADSLAG 227

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ubx	NP_536752.1	Homeodomain	296..352	CDD:459649	48/55 (87%)
hoxc6	XP_004911991.1	Homeodomain	150..206	CDD:459649	48/55 (87%)