DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubx and mnx1

DIOPT Version :9

Sequence 1:NP_536752.1 Gene:Ubx / 42034 FlyBaseID:FBgn0003944 Length:389 Species:Drosophila melanogaster
Sequence 2:XP_002935225.2 Gene:mnx1 / 100496534 XenbaseID:XB-GENE-919890 Length:338 Species:Xenopus tropicalis


Alignment Length:163 Identity:62/163 - (38%)
Similarity:82/163 - (50%) Gaps:21/163 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   222 AAQTAAASSLHQASNHTFYPWMAIAGEC--PEDPTKSKIRSDLTQYGGISTDMGKRYSESLAGSL 284
            :|..|.|:..|.|.::. ||.|..|...  |.||.|       ...|....|...|  .|.||.:
 Frog   104 SAAAALAAGQHPALSYP-YPQMQGAHHAHHPVDPIK-------ISAGTFQLDQWLR--ASTAGMM 158

  Fly   285 LPDWLGTN--------GLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKI 341
            ||.....|        |..||.|..:|..|.||||.:|..|.||:|.:|.|:|.:|.|||.|:||
 Frog   159 LPKMADFNSQAQSNLLGKCRRPRTAFTSQQLLELEHQFKLNKYLSRPKRFEVATSLMLTETQVKI 223

  Fly   342 WFQNRRMKLKKEIQAIKE-LNEQEKQAQAQKAA 373
            ||||||||.|:..:|.:: :.:.|||.:|.|.:
 Frog   224 WFQNRRMKWKRSKKAKEQAVQDAEKQQRAGKGS 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UbxNP_536752.1 Homeobox 299..352 CDD:395001 30/52 (58%)
mnx1XP_002935225.2 Homeobox 180..234 CDD:395001 30/53 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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