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Protein Alignment Ubx and pdx1
DIOPT Version :9
Sequence 1: | NP_536752.1 |
Gene: | Ubx / 42034 |
FlyBaseID: | FBgn0003944 |
Length: | 389 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_002934065.1 |
Gene: | pdx1 / 100490648 |
XenbaseID: | XB-GENE-483331 |
Length: | 271 |
Species: | Xenopus tropicalis |
Alignment Length: | 160 |
Identity: | 55/160 - (34%) |
Similarity: | 71/160 - (44%) |
Gaps: | 48/160 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 229 SSLHQASNHTF--YPWMAIAGECPEDPTKSKIRSDLTQYGGISTDMGKRYSESLAGSLLPDWLGT 291
|:..:..|.|. :||| ..|||. |..| .|.|.
Frog 107 SATLEERNRTLLPFPWM--------KSTKSH-----TWKG--------------------QWTGG 138
Fly 292 NGL-----RRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLK 351
:.: .:|.|..|||.|.|||||||..|.|::|.||:|:|..|.||||.|||||||||||.|
Frog 139 SYIMEQEENKRTRTAYTRAQLLELEKEFLFNKYISRPRRVELAVMLNLTERHIKIWFQNRRMKWK 203
Fly 352 KEIQAIKELNEQEKQAQAQKAAAAAAAAAA 381
|| |.:|:.:.......:..::|
Frog 204 KE--------EDKKRGRGSDPEQDSVVSSA 225
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.910 |
|
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