Protein Alignment Ubx and hlx

DIOPT Version :10

• Sequence 1: NP_536752.1
• Gene: Ubx / 42034
• FlyBaseID: FBgn0003944
• Length: 389
• Species: Drosophila melanogaster
• Sequence 2: XP_004914850.1
• Gene: hlx / 100488508
• XenbaseID: XB-GENE-483226
• Length: 397
• Species: Xenopus tropicalis
• Alignment Length: 326
• Identity: 80/326 - (24%)
• Similarity: 117/326 - (35%)
• Gaps: 91/326 - (27%)

  Fly   114 GGGGGGGGGGAGGTGG------AGNANGGNAANANG---------------QNNPAGGMPVRPSA 157
            |.|.|..|..|..||.      |...:||:..:..|               |..|||. |.||:.
 Frog    25 GAGSGAAGFPALDTGKKPSFCIADILHGGDPESPPGSSALTAASVGVIHPAQYQPAGS-PFRPTP 88

  Fly   158 CTPDSRVGGYLDTSGGSPV----SHRGGSAGGNVSVSGGNGN-------------AGGVQSGVG- 204
            .||:|.....|     ||:    .||.      ||:...|.:             :..::.|:.
 Frog    89 VTPESSFHHRL-----SPLPPYQPHRA------VSLCTNNSSRARMHKSTQPAPCSKDLKFGIDR 142

  Fly   205 ---------VAGAGTAWNANCTISGAAAQTAAASSLHQASNHTFYPWMAIAGECPEDPTKSKIRS 260
                     |....|..:....||...........:...:.|.|.| :...||.         .|
 Frog   143 ILSAEFDPKVKEGNTLRDLTSLISAGQQSGLPGQHMQSTAGHFFAP-LEPLGEA---------SS 197

  Fly   261 DLTQYGGISTDMGKRYSESLAGS-------------LLPDWLGTNGLRRR--GRQTYTRYQTLEL 310
            .|.|..|......:::.::..|.             |..|.:.....|:|  .|..::..|...|
 Frog   198 LLGQLNGSQRSSVQQFQDTFPGDGSRKLYMWGPYAVLTKDTMPQTYKRKRSWSRAVFSNLQRKGL 262

  Fly   311 EKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLK--KEIQAIKELNEQEKQAQAQKAA 373
            ||.|....|:|:..|.::|..|.||:.|:|:||||||||.:  ||.||.|:..::|    |:|..
 Frog   263 EKRFEVQKYVTKPDRKQLAAMLGLTDAQVKVWFQNRRMKWRHSKEAQAQKDKEKEE----AEKPE 323

  Fly   374 A 374
            |
 Frog   324 A 324

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ubx	NP_536752.1	Homeodomain	296..352	CDD:459649	24/59 (41%)
hlx	XP_004914850.1	Homeodomain	244..304	CDD:459649	25/59 (42%)