Protein Alignment Ubx and hoxc12

DIOPT Version :10

• Sequence 1: NP_536752.1
• Gene: Ubx / 42034
• FlyBaseID: FBgn0003944
• Length: 389
• Species: Drosophila melanogaster
• Sequence 2: XP_002936693.1
• Gene: hoxc12 / 100487557
• XenbaseID: XB-GENE-853677
• Length: 263
• Species: Xenopus tropicalis
• Alignment Length: 137
• Identity: 50/137 - (36%)
• Similarity: 72/137 - (52%)
• Gaps: 14/137 - (10%)

  Fly   229 SSLHQASNHTF--YPWMAIAGECPEDP-----TKSKIRSDLTQYG--GISTDMGKRYSESLAGSL 284
            |.:|.|.|.||  |.:.|: ...|.||     .:|...|.|...|  ...::.....|.|..|:.
 Frog   117 SGIHSAMNSTFQKYDYTAV-DSVPHDPPSCQSLESDSGSSLLNEGTKNAVSEAATMASPSNPGNS 180

  Fly   285 LP----DWLGTNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQN 345
            ||    .|...:...|:.|:.|::.|..|||.||..|.::||:||.|::..|.|:::|:||||||
 Frog   181 LPASGAPWYPIHTRSRKKRKPYSKIQLAELEGEFMVNEFITRQRRRELSDRLSLSDQQVKIWFQN 245

  Fly   346 RRMKLKK 352
            ||||.|:
 Frog   246 RRMKKKR 252

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ubx	NP_536752.1	Homeodomain	296..352	CDD:459649	28/55 (51%)
hoxc12	XP_002936693.1	Homeodomain	196..252	CDD:459649	28/55 (51%)