Protein Alignment Ubx and Hoxb2

DIOPT Version :10

• Sequence 1: NP_536752.1
• Gene: Ubx / 42034
• FlyBaseID: FBgn0003944
• Length: 389
• Species: Drosophila melanogaster
• Sequence 2: NP_001386664.1
• Gene: Hoxb2 / 100361765
• RGDID: 2319509
• Length: 355
• Species: Rattus norvegicus
• Alignment Length: 164
• Identity: 59/164 - (35%)
• Similarity: 76/164 - (46%)
• Gaps: 33/164 - (20%)

  Fly   241 PWMAIAGECPEDPTKSKIRSDLTQYGGISTDMGKRYSESLA-------------------GSLLP 286
            |.:.:|...||.|...:.:|            .|:.|:|.|                   |..||
  Rat    83 PPLPVAPPAPEFPWMKEKKS------------AKKPSQSAATPSPAASSVRASGVGSPSDGPGLP 135

  Fly   287 DWLGTNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLK 351
            :..|:..  ||.|..||..|.||||||||.|.||.|.||:|:|..|.|||||:|:||||||||.|
  Rat   136 ESGGSGS--RRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHK 198

  Fly   352 KEIQAIKELNEQEKQAQAQKAAAAAAAAAAVQGG 385
            ::.|..:..:.:.....||..|...|....|..|
  Rat   199 RQTQHREPPDGEPGGLSAQDDAGEPAEEPTVSPG 232

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ubx	NP_536752.1	Homeodomain	296..352	CDD:459649	37/55 (67%)
Hoxb2	NP_001386664.1	Homeodomain	143..199	CDD:459649	37/55 (67%)